Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
MTHFRP42898 AC026202.3-201ENST00000600805 1127 ntBASIC26.35■■□□□ 1.81
MTHFRP42898 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
MTHFRP42898 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
MTHFRP42898 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFRP42898 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MTHFRP42898 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.33■■□□□ 1.81
MTHFRP42898 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MTHFRP42898 AL359258.2-201ENST00000564063 1566 ntBASIC26.32■■□□□ 1.8
MTHFRP42898 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.31■■□□□ 1.8
MTHFRP42898 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFRP42898 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFRP42898 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFRP42898 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
MTHFRP42898 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.3■■□□□ 1.8
MTHFRP42898 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MTHFRP42898 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.3■■□□□ 1.8
MTHFRP42898 BHLHE23-202ENST00000612929 1109 ntBASIC26.3■■□□□ 1.8
MTHFRP42898 AC074183.2-201ENST00000623112 922 ntBASIC26.3■■□□□ 1.8
MTHFRP42898 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
MTHFRP42898 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.3■■□□□ 1.8
MTHFRP42898 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.28■■□□□ 1.8
MTHFRP42898 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFRP42898 DUX4L9-201ENST00000449051 1259 ntBASIC26.28■■□□□ 1.8
MTHFRP42898 RP9P-202ENST00000450133 1212 ntBASIC26.28■■□□□ 1.8
MTHFRP42898 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.28■■□□□ 1.8
MTHFRP42898 AC025884.2-201ENST00000553429 711 ntBASIC26.28■■□□□ 1.8
MTHFRP42898 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
MTHFRP42898 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFRP42898 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFRP42898 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MTHFRP42898 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.27■■□□□ 1.8
MTHFRP42898 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
MTHFRP42898 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MTHFRP42898 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
MTHFRP42898 AP004833.2-201ENST00000532228 1454 ntBASIC26.26■■□□□ 1.79
MTHFRP42898 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MTHFRP42898 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
MTHFRP42898 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.25■■□□□ 1.79
MTHFRP42898 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFRP42898 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.25■■□□□ 1.79
MTHFRP42898 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFRP42898 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.25■■□□□ 1.79
MTHFRP42898 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFRP42898 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.25■■□□□ 1.79
MTHFRP42898 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
MTHFRP42898 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.24■■□□□ 1.79
MTHFRP42898 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFRP42898 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.23■■□□□ 1.79
MTHFRP42898 AC093536.1-201ENST00000569153 554 ntBASIC26.23■■□□□ 1.79
MTHFRP42898 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MTHFRP42898 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
MTHFRP42898 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MTHFRP42898 AC010980.1-201ENST00000587192 1142 ntBASIC26.22■■□□□ 1.79
MTHFRP42898 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.22■■□□□ 1.79
MTHFRP42898 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
MTHFRP42898 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
MTHFRP42898 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
MTHFRP42898 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
MTHFRP42898 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.21■■□□□ 1.79
MTHFRP42898 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.21■■□□□ 1.79
MTHFRP42898 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MTHFRP42898 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.2■■□□□ 1.79
MTHFRP42898 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MTHFRP42898 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
MTHFRP42898 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MTHFRP42898 RAP2CP1-202ENST00000605179 643 ntBASIC26.2■■□□□ 1.78
MTHFRP42898 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MTHFRP42898 AC139795.1-202ENST00000500444 432 ntBASIC26.19■■□□□ 1.78
MTHFRP42898 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.19■■□□□ 1.78
MTHFRP42898 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
MTHFRP42898 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.19■■□□□ 1.78
MTHFRP42898 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MTHFRP42898 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MTHFRP42898 AL592295.1-201ENST00000400984 884 ntBASIC26.18■■□□□ 1.78
MTHFRP42898 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.18■■□□□ 1.78
MTHFRP42898 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.18■■□□□ 1.78
MTHFRP42898 KRT8P33-201ENST00000508125 1423 ntBASIC26.18■■□□□ 1.78
MTHFRP42898 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.18■■□□□ 1.78
MTHFRP42898 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
MTHFRP42898 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.16■■□□□ 1.78
MTHFRP42898 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MTHFRP42898 YBX1P4-201ENST00000392794 808 ntBASIC26.16■■□□□ 1.78
MTHFRP42898 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
MTHFRP42898 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.16■■□□□ 1.78
MTHFRP42898 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
MTHFRP42898 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
MTHFRP42898 AC009299.2-201ENST00000482477 511 ntBASIC26.15■■□□□ 1.78
MTHFRP42898 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.15■■□□□ 1.78
MTHFRP42898 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.15■■□□□ 1.78
MTHFRP42898 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
MTHFRP42898 MIR6765-201ENST00000614092 87 ntBASIC26.15■■□□□ 1.78
MTHFRP42898 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.15■■□□□ 1.78
MTHFRP42898 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.14■■□□□ 1.78
MTHFRP42898 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
MTHFRP42898 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
MTHFRP42898 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
MTHFRP42898 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.14■■□□□ 1.78
MTHFRP42898 SPCS2P3-201ENST00000500401 656 ntBASIC26.14■■□□□ 1.78
MTHFRP42898 MIR3960-201ENST00000583311 91 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 781.5 ms