Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL5P42830 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL5P42830 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCL5P42830 AC091060.1-201ENST00000623524 1766 ntBASIC16.64■□□□□ 0.25
CXCL5P42830 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL5P42830 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL5P42830 MIR762-201ENST00000390236 83 ntBASIC16.64■□□□□ 0.25
CXCL5P42830 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL5P42830 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL5P42830 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL5P42830 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CXCL5P42830 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCL5P42830 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCL5P42830 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL5P42830 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL5P42830 AC097358.2-201ENST00000607541 1159 ntBASIC16.63■□□□□ 0.25
CXCL5P42830 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL5P42830 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL5P42830 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL5P42830 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL5P42830 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL5P42830 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CXCL5P42830 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CXCL5P42830 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CXCL5P42830 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CXCL5P42830 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCL5P42830 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL5P42830 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL5P42830 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL5P42830 AC108673.1-201ENST00000510422 1159 ntBASIC16.61■□□□□ 0.25
CXCL5P42830 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.61■□□□□ 0.25
CXCL5P42830 AC136428.2-201ENST00000563187 214 ntBASIC16.61■□□□□ 0.25
CXCL5P42830 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.61■□□□□ 0.25
CXCL5P42830 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL5P42830 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CXCL5P42830 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.6■□□□□ 0.25
CXCL5P42830 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXCL5P42830 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CXCL5P42830 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCL5P42830 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCL5P42830 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CXCL5P42830 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCL5P42830 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CXCL5P42830 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.58■□□□□ 0.24
CXCL5P42830 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCL5P42830 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.58■□□□□ 0.24
CXCL5P42830 LINC00273-201ENST00000539813 1452 ntBASIC16.58■□□□□ 0.24
CXCL5P42830 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCL5P42830 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCL5P42830 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCL5P42830 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCL5P42830 WHAMMP2-203ENST00000563942 1603 ntBASIC16.57■□□□□ 0.24
CXCL5P42830 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.57■□□□□ 0.24
CXCL5P42830 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCL5P42830 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CXCL5P42830 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.56■□□□□ 0.24
CXCL5P42830 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.56■□□□□ 0.24
CXCL5P42830 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CXCL5P42830 AC005559.1-201ENST00000589661 871 ntBASIC16.56■□□□□ 0.24
CXCL5P42830 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.56■□□□□ 0.24
CXCL5P42830 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCL5P42830 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCL5P42830 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCL5P42830 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.55■□□□□ 0.24
CXCL5P42830 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CXCL5P42830 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CXCL5P42830 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCL5P42830 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCL5P42830 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.55■□□□□ 0.24
CXCL5P42830 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CXCL5P42830 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCL5P42830 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.55■□□□□ 0.24
CXCL5P42830 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CXCL5P42830 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCL5P42830 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
CXCL5P42830 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CXCL5P42830 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCL5P42830 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CXCL5P42830 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCL5P42830 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.53■□□□□ 0.24
CXCL5P42830 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms