Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DUX4L22-201ENST00000618238 1269 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L20-201ENST00000619712 1269 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L21-201ENST00000622058 1269 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L10-201ENST00000622460 1267 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L25-201ENST00000624915 1269 ntBASIC20.96■□□□□ 0.95
LMO1P25800 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LMO1P25800 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LMO1P25800 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LMO1P25800 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LMO1P25800 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LMO1P25800 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO1P25800 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.94■□□□□ 0.94
LMO1P25800 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO1P25800 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
LMO1P25800 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
LMO1P25800 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LMO1P25800 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO1P25800 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LMO1P25800 ZNRF2P2-203ENST00000454624 420 ntBASIC20.92■□□□□ 0.94
LMO1P25800 DUX4L11-201ENST00000611504 1267 ntBASIC20.92■□□□□ 0.94
LMO1P25800 DUX4L12-201ENST00000614593 1267 ntBASIC20.92■□□□□ 0.94
LMO1P25800 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.92■□□□□ 0.94
LMO1P25800 DUX4L14-201ENST00000621227 1267 ntBASIC20.92■□□□□ 0.94
LMO1P25800 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.92■□□□□ 0.94
LMO1P25800 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.92■□□□□ 0.94
LMO1P25800 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.91■□□□□ 0.94
LMO1P25800 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.91■□□□□ 0.94
LMO1P25800 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO1P25800 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO1P25800 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
LMO1P25800 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMO1P25800 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMO1P25800 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO1P25800 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.9■□□□□ 0.94
LMO1P25800 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LMO1P25800 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
LMO1P25800 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LMO1P25800 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LMO1P25800 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LMO1P25800 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.89■□□□□ 0.93
LMO1P25800 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMO1P25800 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.88■□□□□ 0.93
LMO1P25800 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO1P25800 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMO1P25800 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMO1P25800 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO1P25800 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LMO1P25800 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO1P25800 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO1P25800 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO1P25800 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO1P25800 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LMO1P25800 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMO1P25800 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.85■□□□□ 0.93
LMO1P25800 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.85■□□□□ 0.93
LMO1P25800 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO1P25800 ABHD17AP4-201ENST00000411545 909 ntBASIC20.85■□□□□ 0.93
LMO1P25800 AC008813.1-201ENST00000536597 885 ntBASIC20.85■□□□□ 0.93
LMO1P25800 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.84■□□□□ 0.93
LMO1P25800 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO1P25800 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO1P25800 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO1P25800 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LMO1P25800 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO1P25800 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.84■□□□□ 0.93
LMO1P25800 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LMO1P25800 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMO1P25800 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO1P25800 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.83■□□□□ 0.93
LMO1P25800 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO1P25800 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.83■□□□□ 0.93
LMO1P25800 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.83■□□□□ 0.92
LMO1P25800 AL449106.1-201ENST00000608517 1980 ntBASIC20.83■□□□□ 0.92
LMO1P25800 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LMO1P25800 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO1P25800 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO1P25800 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LMO1P25800 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO1P25800 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.82■□□□□ 0.92
LMO1P25800 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO1P25800 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.81■□□□□ 0.92
LMO1P25800 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.81■□□□□ 0.92
LMO1P25800 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LMO1P25800 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO1P25800 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMO1P25800 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LMO1P25800 WHAMMP3-201ENST00000611636 1609 ntBASIC20.81■□□□□ 0.92
LMO1P25800 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO1P25800 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.8■□□□□ 0.92
LMO1P25800 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.8■□□□□ 0.92
LMO1P25800 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.8■□□□□ 0.92
LMO1P25800 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMO1P25800 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.79■□□□□ 0.92
LMO1P25800 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.79■□□□□ 0.92
LMO1P25800 AC148477.6-201ENST00000623746 465 ntBASIC20.79■□□□□ 0.92
LMO1P25800 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO1P25800 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO1P25800 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LMO1P25800 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LMO1P25800 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms