Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.57■■□□□ 1.04
ACKR3P25106 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACKR3P25106 LINC01971-201ENST00000617888 1048 ntBASIC21.57■■□□□ 1.04
ACKR3P25106 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.57■■□□□ 1.04
ACKR3P25106 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACKR3P25106 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ACKR3P25106 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.56■■□□□ 1.04
ACKR3P25106 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.56■■□□□ 1.04
ACKR3P25106 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACKR3P25106 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACKR3P25106 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
ACKR3P25106 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACKR3P25106 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ACKR3P25106 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.54■■□□□ 1.04
ACKR3P25106 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACKR3P25106 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACKR3P25106 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.54■■□□□ 1.04
ACKR3P25106 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.54■■□□□ 1.04
ACKR3P25106 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ACKR3P25106 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACKR3P25106 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACKR3P25106 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACKR3P25106 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ACKR3P25106 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ACKR3P25106 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.53■■□□□ 1.04
ACKR3P25106 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ACKR3P25106 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ACKR3P25106 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.53■■□□□ 1.04
ACKR3P25106 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.53■■□□□ 1.04
ACKR3P25106 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ACKR3P25106 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACKR3P25106 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
ACKR3P25106 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACKR3P25106 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ACKR3P25106 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.52■■□□□ 1.04
ACKR3P25106 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.51■■□□□ 1.03
ACKR3P25106 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.51■■□□□ 1.03
ACKR3P25106 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ACKR3P25106 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.5■■□□□ 1.03
ACKR3P25106 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.5■■□□□ 1.03
ACKR3P25106 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.49■■□□□ 1.03
ACKR3P25106 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ACKR3P25106 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.49■■□□□ 1.03
ACKR3P25106 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ACKR3P25106 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L13-201ENST00000554103 1267 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L15-201ENST00000611059 1267 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L23-201ENST00000615195 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L24-201ENST00000617576 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L22-201ENST00000618238 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L20-201ENST00000619712 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L21-201ENST00000622058 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L10-201ENST00000622460 1267 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DUX4L25-201ENST00000624915 1269 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ACKR3P25106 AL449106.1-201ENST00000608517 1980 ntBASIC21.48■■□□□ 1.03
ACKR3P25106 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.48■■□□□ 1.03
ACKR3P25106 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ACKR3P25106 ZNRF2P2-203ENST00000454624 420 ntBASIC21.47■■□□□ 1.03
ACKR3P25106 DUX4L11-201ENST00000611504 1267 ntBASIC21.47■■□□□ 1.03
ACKR3P25106 DUX4L12-201ENST00000614593 1267 ntBASIC21.47■■□□□ 1.03
ACKR3P25106 DUX4L14-201ENST00000621227 1267 ntBASIC21.47■■□□□ 1.03
ACKR3P25106 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.47■■□□□ 1.03
ACKR3P25106 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ACKR3P25106 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACKR3P25106 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACKR3P25106 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.45■■□□□ 1.02
ACKR3P25106 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.45■■□□□ 1.02
ACKR3P25106 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.44■■□□□ 1.02
ACKR3P25106 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.44■■□□□ 1.02
ACKR3P25106 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACKR3P25106 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ACKR3P25106 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.43■■□□□ 1.02
ACKR3P25106 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACKR3P25106 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACKR3P25106 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ACKR3P25106 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ACKR3P25106 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ACKR3P25106 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ACKR3P25106 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
ACKR3P25106 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ACKR3P25106 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.42■■□□□ 1.02
ACKR3P25106 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ACKR3P25106 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.41■■□□□ 1.02
ACKR3P25106 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ACKR3P25106 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ACKR3P25106 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ACKR3P25106 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ACKR3P25106 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ACKR3P25106 WHAMMP3-201ENST00000611636 1609 ntBASIC21.4■■□□□ 1.02
ACKR3P25106 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ACKR3P25106 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ACKR3P25106 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms