Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RTCAO00442 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCAO00442 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTCAO00442 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.82■■□□□ 1.4
RTCAO00442 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTCAO00442 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RTCAO00442 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.82■■□□□ 1.4
RTCAO00442 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCAO00442 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RTCAO00442 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RTCAO00442 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTCAO00442 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.81■■□□□ 1.4
RTCAO00442 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTCAO00442 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.8■■□□□ 1.4
RTCAO00442 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTCAO00442 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RTCAO00442 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RTCAO00442 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTCAO00442 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTCAO00442 AC008813.1-201ENST00000536597 885 ntBASIC23.79■■□□□ 1.4
RTCAO00442 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.78■■□□□ 1.4
RTCAO00442 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.78■■□□□ 1.4
RTCAO00442 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.78■■□□□ 1.4
RTCAO00442 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTCAO00442 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.77■■□□□ 1.4
RTCAO00442 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTCAO00442 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
RTCAO00442 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RTCAO00442 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
RTCAO00442 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.75■■□□□ 1.39
RTCAO00442 MIR219A2-201ENST00000608502 1504 ntBASIC23.75■■□□□ 1.39
RTCAO00442 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
RTCAO00442 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCAO00442 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCAO00442 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RTCAO00442 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCAO00442 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.74■■□□□ 1.39
RTCAO00442 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.74■■□□□ 1.39
RTCAO00442 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.74■■□□□ 1.39
RTCAO00442 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.74■■□□□ 1.39
RTCAO00442 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.74■■□□□ 1.39
RTCAO00442 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCAO00442 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCAO00442 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTCAO00442 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCAO00442 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.73■■□□□ 1.39
RTCAO00442 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCAO00442 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RTCAO00442 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTCAO00442 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RTCAO00442 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.73■■□□□ 1.39
RTCAO00442 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCAO00442 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.72■■□□□ 1.39
RTCAO00442 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTCAO00442 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCAO00442 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RTCAO00442 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCAO00442 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
RTCAO00442 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RTCAO00442 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCAO00442 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTCAO00442 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCAO00442 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RTCAO00442 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.71■■□□□ 1.39
RTCAO00442 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTCAO00442 AC148477.6-201ENST00000623746 465 ntBASIC23.71■■□□□ 1.39
RTCAO00442 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RTCAO00442 AL449106.1-201ENST00000608517 1980 ntBASIC23.71■■□□□ 1.39
RTCAO00442 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTCAO00442 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RTCAO00442 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCAO00442 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCAO00442 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCAO00442 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RTCAO00442 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
RTCAO00442 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTCAO00442 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RTCAO00442 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCAO00442 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTCAO00442 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTCAO00442 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCAO00442 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
RTCAO00442 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.67■■□□□ 1.38
RTCAO00442 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCAO00442 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCAO00442 WHAMMP3-201ENST00000611636 1609 ntBASIC23.66■■□□□ 1.38
RTCAO00442 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RTCAO00442 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTCAO00442 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTCAO00442 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.66■■□□□ 1.38
RTCAO00442 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.66■■□□□ 1.38
RTCAO00442 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.66■■□□□ 1.38
RTCAO00442 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.66■■□□□ 1.38
RTCAO00442 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTCAO00442 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.65■■□□□ 1.38
RTCAO00442 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
RTCAO00442 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTCAO00442 MIR639-201ENST00000384974 98 ntBASIC23.65■■□□□ 1.38
RTCAO00442 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
RTCAO00442 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms