Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L13-201ENST00000554103 1267 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L15-201ENST00000611059 1267 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L23-201ENST00000615195 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L24-201ENST00000617576 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L22-201ENST00000618238 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L20-201ENST00000619712 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L21-201ENST00000622058 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L10-201ENST00000622460 1267 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L25-201ENST00000624915 1269 ntBASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV1A0A0A0MS02 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 ABHD17AP4-201ENST00000411545 909 ntBASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRGV1A0A0A0MS02 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRGV1A0A0A0MS02 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRGV1A0A0A0MS02 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV1A0A0A0MS02 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.94■□□□□ 0.46
TRGV1A0A0A0MS02 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV1A0A0A0MS02 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV1A0A0A0MS02 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV1A0A0A0MS02 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV1A0A0A0MS02 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.9■□□□□ 0.46
TRGV1A0A0A0MS02 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV1A0A0A0MS02 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV1A0A0A0MS02 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRGV1A0A0A0MS02 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.89■□□□□ 0.46
TRGV1A0A0A0MS02 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV1A0A0A0MS02 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRGV1A0A0A0MS02 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRGV1A0A0A0MS02 AC008813.1-201ENST00000536597 885 ntBASIC17.88■□□□□ 0.45
TRGV1A0A0A0MS02 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRGV1A0A0A0MS02 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV1A0A0A0MS02 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms