Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC092803.2-201ENST00000564287 1899 ntBASIC21.33■■□□□ 1.01
TRAV18A0A075B6X5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TRAV18A0A075B6X5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV18A0A075B6X5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRAV18A0A075B6X5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TRAV18A0A075B6X5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV18A0A075B6X5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV18A0A075B6X5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.32■■□□□ 1
TRAV18A0A075B6X5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAV18A0A075B6X5 AC135983.2-203ENST00000454486 1613 ntBASIC21.3■■□□□ 1
TRAV18A0A075B6X5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV18A0A075B6X5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV18A0A075B6X5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV18A0A075B6X5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TRAV18A0A075B6X5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV18A0A075B6X5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRAV18A0A075B6X5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV18A0A075B6X5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
TRAV18A0A075B6X5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TRAV18A0A075B6X5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.27■■□□□ 1
TRAV18A0A075B6X5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV18A0A075B6X5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV18A0A075B6X5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.27■□□□□ 0.99
TRAV18A0A075B6X5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV18A0A075B6X5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 CAHM-201ENST00000604200 896 ntBASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 AP004609.3-201ENST00000610705 1884 ntBASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 AC093323.1-202ENST00000635031 2045 ntBASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 WHAMMP2-203ENST00000563942 1603 ntBASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV18A0A075B6X5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.24■□□□□ 0.99
TRAV18A0A075B6X5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV18A0A075B6X5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV18A0A075B6X5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV18A0A075B6X5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRAV18A0A075B6X5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV18A0A075B6X5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.22■□□□□ 0.99
TRAV18A0A075B6X5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV18A0A075B6X5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV18A0A075B6X5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAV18A0A075B6X5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV18A0A075B6X5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV18A0A075B6X5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRAV18A0A075B6X5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.21■□□□□ 0.99
TRAV18A0A075B6X5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRAV18A0A075B6X5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRAV18A0A075B6X5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRAV18A0A075B6X5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV18A0A075B6X5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV18A0A075B6X5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAV18A0A075B6X5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms