Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.317e-8■□□□□ 10.7
SRSF1Q07955 TARS-209ENST00000507716 2475 ntTSL 26.43□□□□□ -1.387e-8■□□□□ 10.7
SRSF1Q07955 TARS-214ENST00000514259 466 ntTSL 44.84□□□□□ -1.637e-8■□□□□ 10.7
SRSF1Q07955 PLCG1-210ENST00000483646 591 ntTSL 39.41□□□□□ -0.91e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-207ENST00000557810 947 ntTSL 220.05■□□□□ 0.83e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-234ENST00000561001 545 ntTSL 418.62■□□□□ 0.573e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-238ENST00000561375 748 ntTSL 317.61■□□□□ 0.413e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-233ENST00000560901 603 ntTSL 316.45■□□□□ 0.223e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-232ENST00000560713 543 ntTSL 416.14■□□□□ 0.173e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-221ENST00000559382 549 ntTSL 516.14■□□□□ 0.173e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-216ENST00000559017 849 ntTSL 515.14■□□□□ 0.013e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-235ENST00000561016 522 ntTSL 415.03■□□□□ -03e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-237ENST00000561056 577 ntTSL 415.03■□□□□ -03e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-228ENST00000560171 590 ntTSL 314.96□□□□□ -0.013e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-226ENST00000559796 476 ntTSL 414.96□□□□□ -0.013e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-231ENST00000560614 547 ntTSL 414.25□□□□□ -0.133e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-210ENST00000558215 581 ntTSL 413.28□□□□□ -0.283e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-213ENST00000558638 581 ntTSL 413.18□□□□□ -0.33e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-220ENST00000559354 547 ntTSL 413.18□□□□□ -0.33e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-206ENST00000557809 568 ntTSL 412.62□□□□□ -0.393e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.453e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-215ENST00000558914 2342 ntTSL 212□□□□□ -0.493e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-225ENST00000559593 575 ntTSL 411.79□□□□□ -0.523e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-236ENST00000561041 570 ntTSL 310.77□□□□□ -0.693e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-209ENST00000557952 444 ntTSL 510.77□□□□□ -0.693e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-223ENST00000559451 659 ntTSL 510.59□□□□□ -0.713e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.753e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-214ENST00000558706 641 ntTSL 410.28□□□□□ -0.763e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-230ENST00000560459 587 ntTSL 410.28□□□□□ -0.763e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-229ENST00000560457 578 ntTSL 310.28□□□□□ -0.763e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC10.23□□□□□ -0.773e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-205ENST00000557802 4202 ntTSL 1 (best)10.07□□□□□ -0.83e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-201ENST00000326009 2570 ntTSL 1 (best)9.82□□□□□ -0.843e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC9.71□□□□□ -0.863e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-208ENST00000557888 552 ntTSL 48.49□□□□□ -1.053e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-219ENST00000559288 575 ntTSL 47.56□□□□□ -1.23e-8■□□□□ 10.7
SRSF1Q07955 DCAF11-211ENST00000558408 592 ntTSL 26.72□□□□□ -1.333e-8■□□□□ 10.7
SRSF1Q07955 FGFR3-209ENST00000507588 336 ntTSL 1 (best)17.87■□□□□ 0.454e-8■□□□□ 10.7
SRSF1Q07955 SETD5-211ENST00000443339 3478 ntTSL 28.28□□□□□ -1.083e-7■□□□□ 10.7
SRSF1Q07955 SETD5-210ENST00000442373 900 ntTSL 57□□□□□ -1.293e-7■□□□□ 10.7
SRSF1Q07955 LARP1-204ENST00000518297 2630 ntTSL 516.19■□□□□ 0.182e-8■□□□□ 10.7
SRSF1Q07955 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.862e-8■□□□□ 10.7
SRSF1Q07955 LARP1-202ENST00000517616 501 ntTSL 53.53□□□□□ -1.842e-8■□□□□ 10.7
SRSF1Q07955 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.01□□□□□ -0.334e-7■□□□□ 10.7
SRSF1Q07955 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.434e-7■□□□□ 10.7
SRSF1Q07955 HLF-204ENST00000572002 1251 ntTSL 311.63□□□□□ -0.554e-7■□□□□ 10.7
SRSF1Q07955 HLF-203ENST00000570962 1310 ntTSL 211.31□□□□□ -0.64e-7■□□□□ 10.7
SRSF1Q07955 HLF-207ENST00000573422 493 ntTSL 411.2□□□□□ -0.624e-7■□□□□ 10.7
SRSF1Q07955 HLF-209ENST00000575307 582 ntTSL 210.98□□□□□ -0.654e-7■□□□□ 10.7
SRSF1Q07955 HLF-208ENST00000573945 2977 ntTSL 5 BASIC7.08□□□□□ -1.284e-7■□□□□ 10.7
SRSF1Q07955 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.09□□□□□ -1.434e-7■□□□□ 10.7
SRSF1Q07955 USP34-211ENST00000472706 556 ntTSL 44.17□□□□□ -1.743e-6■□□□□ 10.7
SRSF1Q07955 USP34-205ENST00000453734 2708 ntTSL 1 (best)2.89□□□□□ -1.953e-6■□□□□ 10.7
SRSF1Q07955 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.96■■□□□ 1.596e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.24■■□□□ 1.316e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-218ENST00000576343 1006 ntTSL 522.52■■□□□ 1.26e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.78■■□□□ 1.086e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.66■□□□□ 0.746e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.566e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.29■□□□□ 0.366e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-217ENST00000574343 693 ntTSL 216.69■□□□□ 0.266e-9■□□□□ 10.7
SRSF1Q07955 NPEPL1-209ENST00000533788 899 ntTSL 514.61□□□□□ -0.076e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-212ENST00000572995 804 ntTSL 314.23□□□□□ -0.136e-9■□□□□ 10.7
SRSF1Q07955 PCYT2-211ENST00000572924 732 ntTSL 213.84□□□□□ -0.196e-9■□□□□ 10.7
SRSF1Q07955 ENOSF1-215ENST00000583771 436 ntTSL 521.99■■□□□ 1.112e-6■□□□□ 10.7
SRSF1Q07955 MLXIPL-207ENST00000453275 690 ntTSL 518.48■□□□□ 0.555e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.625e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.2□□□□□ -0.625e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.14□□□□□ -0.635e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.04□□□□□ -0.645e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.695e-9■□□□□ 10.7
SRSF1Q07955 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)10.25□□□□□ -0.775e-9■□□□□ 10.7
SRSF1Q07955 CTNND1-238ENST00000534647 866 ntTSL 511.49□□□□□ -0.571e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-224ENST00000530068 579 ntTSL 411.26□□□□□ -0.611e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-235ENST00000533189 498 ntTSL 310.96□□□□□ -0.651e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.061e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.01□□□□□ -1.131e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.211e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.211e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC7.35□□□□□ -1.231e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC7.25□□□□□ -1.251e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.18□□□□□ -1.261e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.05□□□□□ -1.281e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.03□□□□□ -1.281e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.03□□□□□ -1.281e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.02□□□□□ -1.291e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.02□□□□□ -1.291e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7□□□□□ -1.291e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.99□□□□□ -1.291e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC6.81□□□□□ -1.321e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC6.69□□□□□ -1.341e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.66□□□□□ -1.341e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.66□□□□□ -1.341e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.61□□□□□ -1.351e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC6.59□□□□□ -1.361e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.45□□□□□ -1.381e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.41□□□□□ -1.381e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.36□□□□□ -1.391e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.21□□□□□ -1.411e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.19□□□□□ -1.421e-7■□□□□ 10.7
Retrieved 100 of 14,836 protein–RNA pairs in 330.8 ms