RNA–Protein interactions for RNA: ENST00000558408.1

DCAF11-211, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 2

Gene DCAF11, Length 592 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-211ENST00000558408 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
DCAF11-211ENST00000558408 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
DCAF11-211ENST00000558408 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
DCAF11-211ENST00000558408 ABCC9O60706 1549 aa15.51■□□□□ 0.07
DCAF11-211ENST00000558408 CCDC180Q9P1Z9 1646 aa15.3■□□□□ 0.04
DCAF11-211ENST00000558408 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
DCAF11-211ENST00000558408 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
DCAF11-211ENST00000558408 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
DCAF11-211ENST00000558408 NACADO15069 1562 aa14.46□□□□□ -0.09
DCAF11-211ENST00000558408 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
DCAF11-211ENST00000558408 UNC13AQ9UPW8 1703 aa14.42□□□□□ -0.1
DCAF11-211ENST00000558408 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
DCAF11-211ENST00000558408 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
DCAF11-211ENST00000558408 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
DCAF11-211ENST00000558408 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
DCAF11-211ENST00000558408 SCRIBQ14160 1630 aa14.07□□□□□ -0.16
DCAF11-211ENST00000558408 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
DCAF11-211ENST00000558408 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
DCAF11-211ENST00000558408 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
DCAF11-211ENST00000558408 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
DCAF11-211ENST00000558408 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
DCAF11-211ENST00000558408 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
DCAF11-211ENST00000558408 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
DCAF11-211ENST00000558408 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
DCAF11-211ENST00000558408 ATAD2BQ9ULI0 1458 aa13.36□□□□□ -0.27
DCAF11-211ENST00000558408 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
DCAF11-211ENST00000558408 NESP48681 1621 aa13.34□□□□□ -0.27
DCAF11-211ENST00000558408 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
DCAF11-211ENST00000558408 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
DCAF11-211ENST00000558408 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
DCAF11-211ENST00000558408 CUX2O14529 1486 aa13.25□□□□□ -0.29
DCAF11-211ENST00000558408 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
DCAF11-211ENST00000558408 BAZ1BQ9UIG0 1483 aaKnown RBP13.22□□□□□ -0.29
DCAF11-211ENST00000558408 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.29
DCAF11-211ENST00000558408 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
DCAF11-211ENST00000558408 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
DCAF11-211ENST00000558408 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
DCAF11-211ENST00000558408 KIF21AQ7Z4S6 1674 aa13.14□□□□□ -0.31
DCAF11-211ENST00000558408 WIZO95785 1651 aa13.08□□□□□ -0.31
DCAF11-211ENST00000558408 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
DCAF11-211ENST00000558408 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
DCAF11-211ENST00000558408 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
DCAF11-211ENST00000558408 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
DCAF11-211ENST00000558408 WDR62O43379 1518 aa12.91□□□□□ -0.34
DCAF11-211ENST00000558408 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
DCAF11-211ENST00000558408 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
DCAF11-211ENST00000558408 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
DCAF11-211ENST00000558408 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
DCAF11-211ENST00000558408 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
DCAF11-211ENST00000558408 CFTRP13569 1480 aa12.81□□□□□ -0.36
DCAF11-211ENST00000558408 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
DCAF11-211ENST00000558408 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
DCAF11-211ENST00000558408 PRDM2Q13029 1718 aa12.71□□□□□ -0.38
DCAF11-211ENST00000558408 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
DCAF11-211ENST00000558408 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
DCAF11-211ENST00000558408 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
DCAF11-211ENST00000558408 RIMBP3CA6NJZ7 1639 aa12.6□□□□□ -0.39
DCAF11-211ENST00000558408 RIMBP3BA6NNM3 1639 aa12.6□□□□□ -0.39
DCAF11-211ENST00000558408 RIMBP3Q9UFD9 1639 aa12.6□□□□□ -0.39
DCAF11-211ENST00000558408 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
DCAF11-211ENST00000558408 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
DCAF11-211ENST00000558408 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4
DCAF11-211ENST00000558408 DNMBPQ6XZF7 1577 aa12.54□□□□□ -0.4
DCAF11-211ENST00000558408 CHD1O14646 1710 aa12.54□□□□□ -0.4
DCAF11-211ENST00000558408 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.4
DCAF11-211ENST00000558408 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
DCAF11-211ENST00000558408 RAD54L2Q9Y4B4 1467 aa12.51□□□□□ -0.41
DCAF11-211ENST00000558408 FOXD1Q16676 465 aa12.5□□□□□ -0.41
DCAF11-211ENST00000558408 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
DCAF11-211ENST00000558408 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
DCAF11-211ENST00000558408 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
DCAF11-211ENST00000558408 FBLN2P98095 1184 aa12.45□□□□□ -0.42
DCAF11-211ENST00000558408 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
DCAF11-211ENST00000558408 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
DCAF11-211ENST00000558408 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
DCAF11-211ENST00000558408 CUX1P39880 1505 aa12.42□□□□□ -0.42
DCAF11-211ENST00000558408 SOGA1O94964 1423 aa12.4□□□□□ -0.42
DCAF11-211ENST00000558408 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
DCAF11-211ENST00000558408 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
DCAF11-211ENST00000558408 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
DCAF11-211ENST00000558408 ADRA2BP18089 450 aa12.33□□□□□ -0.44
DCAF11-211ENST00000558408 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
DCAF11-211ENST00000558408 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-211ENST00000558408 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
DCAF11-211ENST00000558408 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
DCAF11-211ENST00000558408 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
DCAF11-211ENST00000558408 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
DCAF11-211ENST00000558408 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.45
DCAF11-211ENST00000558408 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
DCAF11-211ENST00000558408 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
DCAF11-211ENST00000558408 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
DCAF11-211ENST00000558408 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
DCAF11-211ENST00000558408 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
DCAF11-211ENST00000558408 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
DCAF11-211ENST00000558408 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
DCAF11-211ENST00000558408 ADAMTS12P58397 1594 aa12.17□□□□□ -0.46
DCAF11-211ENST00000558408 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
DCAF11-211ENST00000558408 GRIN2AQ12879 1464 aa12.15□□□□□ -0.46
DCAF11-211ENST00000558408 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
DCAF11-211ENST00000558408 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms