RNA–Protein interactions for RNA: ENST00000559593.5

DCAF11-225, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 4

Gene DCAF11, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-225ENST00000559593 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
DCAF11-225ENST00000559593 ABCC9O60706 1549 aa26.59■■□□□ 1.85
DCAF11-225ENST00000559593 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.77
DCAF11-225ENST00000559593 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
DCAF11-225ENST00000559593 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
DCAF11-225ENST00000559593 NACADO15069 1562 aa24.89■■□□□ 1.58
DCAF11-225ENST00000559593 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
DCAF11-225ENST00000559593 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
DCAF11-225ENST00000559593 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
DCAF11-225ENST00000559593 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
DCAF11-225ENST00000559593 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
DCAF11-225ENST00000559593 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
DCAF11-225ENST00000559593 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
DCAF11-225ENST00000559593 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
DCAF11-225ENST00000559593 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
DCAF11-225ENST00000559593 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
DCAF11-225ENST00000559593 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
DCAF11-225ENST00000559593 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
DCAF11-225ENST00000559593 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
DCAF11-225ENST00000559593 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
DCAF11-225ENST00000559593 CUX2O14529 1486 aa23.05■■□□□ 1.28
DCAF11-225ENST00000559593 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
DCAF11-225ENST00000559593 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
DCAF11-225ENST00000559593 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
DCAF11-225ENST00000559593 NESP48681 1621 aa22.75■■□□□ 1.23
DCAF11-225ENST00000559593 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
DCAF11-225ENST00000559593 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
DCAF11-225ENST00000559593 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
DCAF11-225ENST00000559593 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
DCAF11-225ENST00000559593 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
DCAF11-225ENST00000559593 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
DCAF11-225ENST00000559593 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
DCAF11-225ENST00000559593 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
DCAF11-225ENST00000559593 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
DCAF11-225ENST00000559593 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
DCAF11-225ENST00000559593 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
DCAF11-225ENST00000559593 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
DCAF11-225ENST00000559593 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
DCAF11-225ENST00000559593 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
DCAF11-225ENST00000559593 WDR62O43379 1518 aa22.14■■□□□ 1.13
DCAF11-225ENST00000559593 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
DCAF11-225ENST00000559593 WIZO95785 1651 aa22.08■■□□□ 1.13
DCAF11-225ENST00000559593 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
DCAF11-225ENST00000559593 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
DCAF11-225ENST00000559593 CFTRP13569 1480 aa21.99■■□□□ 1.11
DCAF11-225ENST00000559593 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
DCAF11-225ENST00000559593 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
DCAF11-225ENST00000559593 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
DCAF11-225ENST00000559593 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
DCAF11-225ENST00000559593 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
DCAF11-225ENST00000559593 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
DCAF11-225ENST00000559593 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
DCAF11-225ENST00000559593 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
DCAF11-225ENST00000559593 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
DCAF11-225ENST00000559593 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
DCAF11-225ENST00000559593 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
DCAF11-225ENST00000559593 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
DCAF11-225ENST00000559593 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
DCAF11-225ENST00000559593 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
DCAF11-225ENST00000559593 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
DCAF11-225ENST00000559593 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
DCAF11-225ENST00000559593 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
DCAF11-225ENST00000559593 FBLN2P98095 1184 aa21.44■■□□□ 1.02
DCAF11-225ENST00000559593 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
DCAF11-225ENST00000559593 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
DCAF11-225ENST00000559593 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
DCAF11-225ENST00000559593 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
DCAF11-225ENST00000559593 CHD1O14646 1710 aa21.32■■□□□ 1
DCAF11-225ENST00000559593 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
DCAF11-225ENST00000559593 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
DCAF11-225ENST00000559593 SOGA1O94964 1423 aa21.3■■□□□ 1
DCAF11-225ENST00000559593 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
DCAF11-225ENST00000559593 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
DCAF11-225ENST00000559593 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
DCAF11-225ENST00000559593 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
DCAF11-225ENST00000559593 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
DCAF11-225ENST00000559593 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
DCAF11-225ENST00000559593 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
DCAF11-225ENST00000559593 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
DCAF11-225ENST00000559593 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
DCAF11-225ENST00000559593 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
DCAF11-225ENST00000559593 CUX1P39880 1505 aa21.05■□□□□ 0.96
DCAF11-225ENST00000559593 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
DCAF11-225ENST00000559593 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
DCAF11-225ENST00000559593 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
DCAF11-225ENST00000559593 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
DCAF11-225ENST00000559593 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
DCAF11-225ENST00000559593 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
DCAF11-225ENST00000559593 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
DCAF11-225ENST00000559593 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
DCAF11-225ENST00000559593 NUP160Q12769 1436 aa20.77■□□□□ 0.91
DCAF11-225ENST00000559593 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.91
DCAF11-225ENST00000559593 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
DCAF11-225ENST00000559593 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
DCAF11-225ENST00000559593 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
DCAF11-225ENST00000559593 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
DCAF11-225ENST00000559593 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
DCAF11-225ENST00000559593 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
DCAF11-225ENST00000559593 EEA1Q15075 1411 aa20.62■□□□□ 0.89
DCAF11-225ENST00000559593 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms