RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
CTNND1-224ENST00000530068 ABCC9O60706 1549 aa25.46■■□□□ 1.67
CTNND1-224ENST00000530068 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
CTNND1-224ENST00000530068 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
CTNND1-224ENST00000530068 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
CTNND1-224ENST00000530068 NACADO15069 1562 aa23.95■■□□□ 1.42
CTNND1-224ENST00000530068 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
CTNND1-224ENST00000530068 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
CTNND1-224ENST00000530068 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
CTNND1-224ENST00000530068 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
CTNND1-224ENST00000530068 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
CTNND1-224ENST00000530068 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
CTNND1-224ENST00000530068 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
CTNND1-224ENST00000530068 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
CTNND1-224ENST00000530068 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
CTNND1-224ENST00000530068 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
CTNND1-224ENST00000530068 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
CTNND1-224ENST00000530068 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
CTNND1-224ENST00000530068 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
CTNND1-224ENST00000530068 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
CTNND1-224ENST00000530068 CUX2O14529 1486 aa22.13■■□□□ 1.13
CTNND1-224ENST00000530068 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
CTNND1-224ENST00000530068 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
CTNND1-224ENST00000530068 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
CTNND1-224ENST00000530068 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CTNND1-224ENST00000530068 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
CTNND1-224ENST00000530068 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
CTNND1-224ENST00000530068 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
CTNND1-224ENST00000530068 NESP48681 1621 aa21.75■■□□□ 1.07
CTNND1-224ENST00000530068 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
CTNND1-224ENST00000530068 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
CTNND1-224ENST00000530068 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
CTNND1-224ENST00000530068 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
CTNND1-224ENST00000530068 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
CTNND1-224ENST00000530068 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
CTNND1-224ENST00000530068 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
CTNND1-224ENST00000530068 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
CTNND1-224ENST00000530068 TRIM41Q8WV44 630 aa21.3■■□□□ 1
CTNND1-224ENST00000530068 WDR62O43379 1518 aa21.27■■□□□ 1
CTNND1-224ENST00000530068 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
CTNND1-224ENST00000530068 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
CTNND1-224ENST00000530068 WIZO95785 1651 aa21.18■□□□□ 0.98
CTNND1-224ENST00000530068 CFTRP13569 1480 aa21.13■□□□□ 0.97
CTNND1-224ENST00000530068 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
CTNND1-224ENST00000530068 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
CTNND1-224ENST00000530068 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
CTNND1-224ENST00000530068 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
CTNND1-224ENST00000530068 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
CTNND1-224ENST00000530068 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
CTNND1-224ENST00000530068 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
CTNND1-224ENST00000530068 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
CTNND1-224ENST00000530068 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
CTNND1-224ENST00000530068 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
CTNND1-224ENST00000530068 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
CTNND1-224ENST00000530068 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
CTNND1-224ENST00000530068 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
CTNND1-224ENST00000530068 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
CTNND1-224ENST00000530068 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
CTNND1-224ENST00000530068 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
CTNND1-224ENST00000530068 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
CTNND1-224ENST00000530068 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.887e-8■■■□□ 16
CTNND1-224ENST00000530068 FBLN2P98095 1184 aa20.56■□□□□ 0.88
CTNND1-224ENST00000530068 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
CTNND1-224ENST00000530068 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
CTNND1-224ENST00000530068 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
CTNND1-224ENST00000530068 SOGA1O94964 1423 aa20.45■□□□□ 0.86
CTNND1-224ENST00000530068 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
CTNND1-224ENST00000530068 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
CTNND1-224ENST00000530068 CHD1O14646 1710 aa20.41■□□□□ 0.86
CTNND1-224ENST00000530068 CHMP7Q8WUX9 453 aaPredicted RBP20.4■□□□□ 0.86
CTNND1-224ENST00000530068 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
CTNND1-224ENST00000530068 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
CTNND1-224ENST00000530068 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
CTNND1-224ENST00000530068 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
CTNND1-224ENST00000530068 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
CTNND1-224ENST00000530068 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
CTNND1-224ENST00000530068 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
CTNND1-224ENST00000530068 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
CTNND1-224ENST00000530068 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
CTNND1-224ENST00000530068 CUX1P39880 1505 aa20.23■□□□□ 0.83
CTNND1-224ENST00000530068 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
CTNND1-224ENST00000530068 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
CTNND1-224ENST00000530068 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
CTNND1-224ENST00000530068 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
CTNND1-224ENST00000530068 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
CTNND1-224ENST00000530068 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.79
CTNND1-224ENST00000530068 GRIN2AQ12879 1464 aa20■□□□□ 0.79
CTNND1-224ENST00000530068 NUP160Q12769 1436 aa19.96■□□□□ 0.79
CTNND1-224ENST00000530068 SUPT5HO00267 1087 aaKnown RBP19.96■□□□□ 0.79
CTNND1-224ENST00000530068 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
CTNND1-224ENST00000530068 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
CTNND1-224ENST00000530068 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
CTNND1-224ENST00000530068 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
CTNND1-224ENST00000530068 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
CTNND1-224ENST00000530068 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
CTNND1-224ENST00000530068 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
CTNND1-224ENST00000530068 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
CTNND1-224ENST00000530068 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
CTNND1-224ENST00000530068 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
CTNND1-224ENST00000530068 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms