RNA–Protein interactions for RNA: ENST00000560457.5

DCAF11-229, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-229ENST00000560457 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
DCAF11-229ENST00000560457 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
DCAF11-229ENST00000560457 ABCC9O60706 1549 aa23.68■■□□□ 1.38
DCAF11-229ENST00000560457 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
DCAF11-229ENST00000560457 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
DCAF11-229ENST00000560457 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
DCAF11-229ENST00000560457 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
DCAF11-229ENST00000560457 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
DCAF11-229ENST00000560457 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
DCAF11-229ENST00000560457 NACADO15069 1562 aa22.65■■□□□ 1.22
DCAF11-229ENST00000560457 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
DCAF11-229ENST00000560457 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
DCAF11-229ENST00000560457 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
DCAF11-229ENST00000560457 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
DCAF11-229ENST00000560457 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
DCAF11-229ENST00000560457 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
DCAF11-229ENST00000560457 RSF1Q96T23 1441 aaPredicted RBP21.86■■□□□ 1.09
DCAF11-229ENST00000560457 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
DCAF11-229ENST00000560457 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
DCAF11-229ENST00000560457 BAZ1AQ9NRL2 1556 aaPredicted RBP21.6■■□□□ 1.05
DCAF11-229ENST00000560457 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
DCAF11-229ENST00000560457 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
DCAF11-229ENST00000560457 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
DCAF11-229ENST00000560457 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
DCAF11-229ENST00000560457 WIZO95785 1651 aa21.37■■□□□ 1.01
DCAF11-229ENST00000560457 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
DCAF11-229ENST00000560457 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
DCAF11-229ENST00000560457 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
DCAF11-229ENST00000560457 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
DCAF11-229ENST00000560457 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
DCAF11-229ENST00000560457 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
DCAF11-229ENST00000560457 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
DCAF11-229ENST00000560457 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
DCAF11-229ENST00000560457 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
DCAF11-229ENST00000560457 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
DCAF11-229ENST00000560457 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
DCAF11-229ENST00000560457 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
DCAF11-229ENST00000560457 EEA1Q15075 1411 aa20.62■□□□□ 0.89
DCAF11-229ENST00000560457 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
DCAF11-229ENST00000560457 NESP48681 1621 aa20.49■□□□□ 0.87
DCAF11-229ENST00000560457 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
DCAF11-229ENST00000560457 CFTRP13569 1480 aa20.39■□□□□ 0.85
DCAF11-229ENST00000560457 SOGA1O94964 1423 aa20.39■□□□□ 0.85
DCAF11-229ENST00000560457 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
DCAF11-229ENST00000560457 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
DCAF11-229ENST00000560457 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
DCAF11-229ENST00000560457 PCGF6Q9BYE7 350 aa20.35■□□□□ 0.85
DCAF11-229ENST00000560457 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
DCAF11-229ENST00000560457 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
DCAF11-229ENST00000560457 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
DCAF11-229ENST00000560457 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
DCAF11-229ENST00000560457 GOLGA3Q08378 1498 aa20.27■□□□□ 0.84
DCAF11-229ENST00000560457 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
DCAF11-229ENST00000560457 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
DCAF11-229ENST00000560457 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
DCAF11-229ENST00000560457 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
DCAF11-229ENST00000560457 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
DCAF11-229ENST00000560457 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
DCAF11-229ENST00000560457 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
DCAF11-229ENST00000560457 CUX2O14529 1486 aa20.23■□□□□ 0.83
DCAF11-229ENST00000560457 KIF21BO75037 1637 aa20.22■□□□□ 0.83
DCAF11-229ENST00000560457 HRCP23327 699 aa20.18■□□□□ 0.82
DCAF11-229ENST00000560457 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
DCAF11-229ENST00000560457 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
DCAF11-229ENST00000560457 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
DCAF11-229ENST00000560457 CUX1P39880 1505 aa20.16■□□□□ 0.82
DCAF11-229ENST00000560457 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
DCAF11-229ENST00000560457 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
DCAF11-229ENST00000560457 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
DCAF11-229ENST00000560457 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
DCAF11-229ENST00000560457 WDR62O43379 1518 aa20.02■□□□□ 0.79
DCAF11-229ENST00000560457 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
DCAF11-229ENST00000560457 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
DCAF11-229ENST00000560457 CLIP1P30622 1438 aa19.93■□□□□ 0.78
DCAF11-229ENST00000560457 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
DCAF11-229ENST00000560457 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
DCAF11-229ENST00000560457 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
DCAF11-229ENST00000560457 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
DCAF11-229ENST00000560457 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
DCAF11-229ENST00000560457 IGF1RP08069 1367 aa19.82■□□□□ 0.76
DCAF11-229ENST00000560457 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
DCAF11-229ENST00000560457 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
DCAF11-229ENST00000560457 APLP2Q06481 763 aa19.76■□□□□ 0.75
DCAF11-229ENST00000560457 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
DCAF11-229ENST00000560457 PPARGC1BQ86YN6 1023 aaKnown RBP19.75■□□□□ 0.75
DCAF11-229ENST00000560457 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
DCAF11-229ENST00000560457 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
DCAF11-229ENST00000560457 ARAP1Q96P48 1450 aa19.64■□□□□ 0.73
DCAF11-229ENST00000560457 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
DCAF11-229ENST00000560457 CUL7Q14999 1698 aa19.62■□□□□ 0.73
DCAF11-229ENST00000560457 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
DCAF11-229ENST00000560457 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
DCAF11-229ENST00000560457 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
DCAF11-229ENST00000560457 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
DCAF11-229ENST00000560457 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
DCAF11-229ENST00000560457 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
DCAF11-229ENST00000560457 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
DCAF11-229ENST00000560457 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
DCAF11-229ENST00000560457 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
DCAF11-229ENST00000560457 MAP3K1Q13233 1512 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms