Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHA6Q9UN73 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHA6Q9UN73 AC008813.1-201ENST00000536597 885 ntBASIC29.02■■■□□ 2.24
PCDHA6Q9UN73 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHA6Q9UN73 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.01■■■□□ 2.24
PCDHA6Q9UN73 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHA6Q9UN73 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.01■■■□□ 2.23
PCDHA6Q9UN73 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHA6Q9UN73 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29■■■□□ 2.23
PCDHA6Q9UN73 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
PCDHA6Q9UN73 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCDHA6Q9UN73 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.99■■■□□ 2.23
PCDHA6Q9UN73 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
PCDHA6Q9UN73 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
PCDHA6Q9UN73 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.98■■■□□ 2.23
PCDHA6Q9UN73 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.98■■■□□ 2.23
PCDHA6Q9UN73 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
PCDHA6Q9UN73 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
PCDHA6Q9UN73 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.96■■■□□ 2.23
PCDHA6Q9UN73 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
PCDHA6Q9UN73 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.96■■■□□ 2.23
PCDHA6Q9UN73 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
PCDHA6Q9UN73 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.95■■■□□ 2.23
PCDHA6Q9UN73 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PCDHA6Q9UN73 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PCDHA6Q9UN73 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHA6Q9UN73 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHA6Q9UN73 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHA6Q9UN73 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHA6Q9UN73 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHA6Q9UN73 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHA6Q9UN73 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.91■■■□□ 2.22
PCDHA6Q9UN73 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
PCDHA6Q9UN73 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.91■■■□□ 2.22
PCDHA6Q9UN73 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PCDHA6Q9UN73 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
PCDHA6Q9UN73 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.9■■■□□ 2.22
PCDHA6Q9UN73 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PCDHA6Q9UN73 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
PCDHA6Q9UN73 AC018358.1-201ENST00000631079 1402 ntBASIC28.89■■■□□ 2.22
PCDHA6Q9UN73 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.89■■■□□ 2.22
PCDHA6Q9UN73 AC148477.6-201ENST00000623746 465 ntBASIC28.88■■■□□ 2.21
PCDHA6Q9UN73 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
PCDHA6Q9UN73 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
PCDHA6Q9UN73 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
PCDHA6Q9UN73 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHA6Q9UN73 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHA6Q9UN73 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.86■■■□□ 2.21
PCDHA6Q9UN73 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.86■■■□□ 2.21
PCDHA6Q9UN73 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHA6Q9UN73 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.85■■■□□ 2.21
PCDHA6Q9UN73 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHA6Q9UN73 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHA6Q9UN73 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHA6Q9UN73 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDHA6Q9UN73 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
PCDHA6Q9UN73 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDHA6Q9UN73 LINC01003-201ENST00000564834 1764 ntBASIC28.83■■■□□ 2.21
PCDHA6Q9UN73 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHA6Q9UN73 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
PCDHA6Q9UN73 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
PCDHA6Q9UN73 MIR219A2-201ENST00000608502 1504 ntBASIC28.83■■■□□ 2.21
PCDHA6Q9UN73 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.83■■■□□ 2.2
PCDHA6Q9UN73 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHA6Q9UN73 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHA6Q9UN73 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
PCDHA6Q9UN73 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.82■■■□□ 2.2
PCDHA6Q9UN73 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.81■■■□□ 2.2
PCDHA6Q9UN73 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PCDHA6Q9UN73 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDHA6Q9UN73 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHA6Q9UN73 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHA6Q9UN73 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHA6Q9UN73 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHA6Q9UN73 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHA6Q9UN73 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 BX255925.1-201ENST00000566954 1854 ntBASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
PCDHA6Q9UN73 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHA6Q9UN73 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.78■■■□□ 2.2
PCDHA6Q9UN73 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHA6Q9UN73 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHA6Q9UN73 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
PCDHA6Q9UN73 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms