Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCDNQ9UBB6 AC010980.1-201ENST00000587192 1142 ntBASIC25.26■■□□□ 1.63
NCDNQ9UBB6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCDNQ9UBB6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCDNQ9UBB6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCDNQ9UBB6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 AL161658.1-201ENST00000623641 1967 ntBASIC25.25■■□□□ 1.63
NCDNQ9UBB6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCDNQ9UBB6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.24■■□□□ 1.63
NCDNQ9UBB6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NCDNQ9UBB6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
NCDNQ9UBB6 YBX1P4-201ENST00000392794 808 ntBASIC25.24■■□□□ 1.63
NCDNQ9UBB6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
NCDNQ9UBB6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.24■■□□□ 1.63
NCDNQ9UBB6 AL157400.5-201ENST00000507624 621 ntBASIC25.24■■□□□ 1.63
NCDNQ9UBB6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.24■■□□□ 1.63
NCDNQ9UBB6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NCDNQ9UBB6 AC127502.1-201ENST00000399971 1502 ntBASIC25.23■■□□□ 1.63
NCDNQ9UBB6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
NCDNQ9UBB6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NCDNQ9UBB6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NCDNQ9UBB6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.22■■□□□ 1.63
NCDNQ9UBB6 AC074183.2-201ENST00000623112 922 ntBASIC25.22■■□□□ 1.63
NCDNQ9UBB6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NCDNQ9UBB6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NCDNQ9UBB6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
NCDNQ9UBB6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NCDNQ9UBB6 GUSBP5-201ENST00000418136 578 ntBASIC25.21■■□□□ 1.63
NCDNQ9UBB6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
NCDNQ9UBB6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NCDNQ9UBB6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
NCDNQ9UBB6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.2■■□□□ 1.62
NCDNQ9UBB6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NCDNQ9UBB6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCDNQ9UBB6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NCDNQ9UBB6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NCDNQ9UBB6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NCDNQ9UBB6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.18■■□□□ 1.62
NCDNQ9UBB6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NCDNQ9UBB6 DUX4L9-201ENST00000449051 1259 ntBASIC25.17■■□□□ 1.62
NCDNQ9UBB6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NCDNQ9UBB6 AC139795.1-202ENST00000500444 432 ntBASIC25.17■■□□□ 1.62
NCDNQ9UBB6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
NCDNQ9UBB6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NCDNQ9UBB6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
NCDNQ9UBB6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
NCDNQ9UBB6 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.16■■□□□ 1.62
NCDNQ9UBB6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
NCDNQ9UBB6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.15■■□□□ 1.62
NCDNQ9UBB6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.15■■□□□ 1.62
NCDNQ9UBB6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
NCDNQ9UBB6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NCDNQ9UBB6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.14■■□□□ 1.62
NCDNQ9UBB6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.14■■□□□ 1.62
NCDNQ9UBB6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NCDNQ9UBB6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.14■■□□□ 1.61
NCDNQ9UBB6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.13■■□□□ 1.61
NCDNQ9UBB6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.13■■□□□ 1.61
NCDNQ9UBB6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NCDNQ9UBB6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
NCDNQ9UBB6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 SMPD5-203ENST00000639008 1464 ntBASIC25.12■■□□□ 1.61
NCDNQ9UBB6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.12■■□□□ 1.61
NCDNQ9UBB6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NCDNQ9UBB6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NCDNQ9UBB6 AC026202.3-201ENST00000600805 1127 ntBASIC25.11■■□□□ 1.61
NCDNQ9UBB6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NCDNQ9UBB6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.1■■□□□ 1.61
NCDNQ9UBB6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NCDNQ9UBB6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
NCDNQ9UBB6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NCDNQ9UBB6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
NCDNQ9UBB6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.09■■□□□ 1.61
NCDNQ9UBB6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.09■■□□□ 1.61
NCDNQ9UBB6 AL356441.2-201ENST00000443009 864 ntBASIC25.09■■□□□ 1.61
NCDNQ9UBB6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.09■■□□□ 1.61
NCDNQ9UBB6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.08■■□□□ 1.61
NCDNQ9UBB6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.08■■□□□ 1.61
NCDNQ9UBB6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NCDNQ9UBB6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.08■■□□□ 1.61
NCDNQ9UBB6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms