Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUEDC2Q9H467 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
CUEDC2Q9H467 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUEDC2Q9H467 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUEDC2Q9H467 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUEDC2Q9H467 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.16■■■□□ 2.1
CUEDC2Q9H467 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.16■■■□□ 2.1
CUEDC2Q9H467 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CUEDC2Q9H467 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUEDC2Q9H467 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUEDC2Q9H467 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUEDC2Q9H467 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CUEDC2Q9H467 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.14■■■□□ 2.1
CUEDC2Q9H467 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CUEDC2Q9H467 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CUEDC2Q9H467 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CUEDC2Q9H467 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CUEDC2Q9H467 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CUEDC2Q9H467 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CUEDC2Q9H467 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CUEDC2Q9H467 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CUEDC2Q9H467 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CUEDC2Q9H467 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CUEDC2Q9H467 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.09■■■□□ 2.09
CUEDC2Q9H467 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CUEDC2Q9H467 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CUEDC2Q9H467 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.09■■■□□ 2.09
CUEDC2Q9H467 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.09■■■□□ 2.09
CUEDC2Q9H467 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
CUEDC2Q9H467 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CUEDC2Q9H467 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CUEDC2Q9H467 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
CUEDC2Q9H467 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L13-201ENST00000554103 1267 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L15-201ENST00000611059 1267 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L23-201ENST00000615195 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L24-201ENST00000617576 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L22-201ENST00000618238 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L20-201ENST00000619712 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L21-201ENST00000622058 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L10-201ENST00000622460 1267 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 DUX4L25-201ENST00000624915 1269 ntBASIC28.07■■■□□ 2.08
CUEDC2Q9H467 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CUEDC2Q9H467 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CUEDC2Q9H467 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CUEDC2Q9H467 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUEDC2Q9H467 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUEDC2Q9H467 DUX4L11-201ENST00000611504 1267 ntBASIC28.03■■■□□ 2.08
CUEDC2Q9H467 DUX4L12-201ENST00000614593 1267 ntBASIC28.03■■■□□ 2.08
CUEDC2Q9H467 DUX4L14-201ENST00000621227 1267 ntBASIC28.03■■■□□ 2.08
CUEDC2Q9H467 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUEDC2Q9H467 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.03■■■□□ 2.08
CUEDC2Q9H467 ZNRF2P2-203ENST00000454624 420 ntBASIC28.02■■■□□ 2.08
CUEDC2Q9H467 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUEDC2Q9H467 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUEDC2Q9H467 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.01■■■□□ 2.07
CUEDC2Q9H467 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28■■■□□ 2.07
CUEDC2Q9H467 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28■■■□□ 2.07
CUEDC2Q9H467 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CUEDC2Q9H467 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28■■■□□ 2.07
CUEDC2Q9H467 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
CUEDC2Q9H467 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CUEDC2Q9H467 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.99■■■□□ 2.07
CUEDC2Q9H467 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.99■■■□□ 2.07
CUEDC2Q9H467 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.98■■■□□ 2.07
CUEDC2Q9H467 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CUEDC2Q9H467 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CUEDC2Q9H467 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.98■■■□□ 2.07
CUEDC2Q9H467 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.98■■■□□ 2.07
CUEDC2Q9H467 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CUEDC2Q9H467 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.96■■■□□ 2.07
CUEDC2Q9H467 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CUEDC2Q9H467 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CUEDC2Q9H467 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
CUEDC2Q9H467 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
CUEDC2Q9H467 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
CUEDC2Q9H467 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.95■■■□□ 2.06
CUEDC2Q9H467 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CUEDC2Q9H467 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CUEDC2Q9H467 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CUEDC2Q9H467 AC008813.1-201ENST00000536597 885 ntBASIC27.94■■■□□ 2.06
CUEDC2Q9H467 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CUEDC2Q9H467 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CUEDC2Q9H467 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CUEDC2Q9H467 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.93■■■□□ 2.06
CUEDC2Q9H467 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.93■■■□□ 2.06
CUEDC2Q9H467 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms