Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCGF1Q9BSM1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.9■□□□□ 0.94
PCGF1Q9BSM1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCGF1Q9BSM1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.9■□□□□ 0.94
PCGF1Q9BSM1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCGF1Q9BSM1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCGF1Q9BSM1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCGF1Q9BSM1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.89■□□□□ 0.93
PCGF1Q9BSM1 AC008813.1-201ENST00000536597 885 ntBASIC20.89■□□□□ 0.93
PCGF1Q9BSM1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCGF1Q9BSM1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.89■□□□□ 0.93
PCGF1Q9BSM1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PCGF1Q9BSM1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCGF1Q9BSM1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.88■□□□□ 0.93
PCGF1Q9BSM1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.88■□□□□ 0.93
PCGF1Q9BSM1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 AC100797.4-201ENST00000631653 1827 ntBASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCGF1Q9BSM1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCGF1Q9BSM1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 AC142086.6-201ENST00000621154 1765 ntBASIC20.85■□□□□ 0.93
PCGF1Q9BSM1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCGF1Q9BSM1 HSD17B1P1-201ENST00000590052 955 ntBASIC20.84■□□□□ 0.93
PCGF1Q9BSM1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCGF1Q9BSM1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCGF1Q9BSM1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCGF1Q9BSM1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCGF1Q9BSM1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCGF1Q9BSM1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.83■□□□□ 0.92
PCGF1Q9BSM1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.83■□□□□ 0.92
PCGF1Q9BSM1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCGF1Q9BSM1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.82■□□□□ 0.92
PCGF1Q9BSM1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
PCGF1Q9BSM1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCGF1Q9BSM1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF1Q9BSM1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 DRD5P2-201ENST00000421395 2012 ntBASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PCGF1Q9BSM1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF1Q9BSM1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF1Q9BSM1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
PCGF1Q9BSM1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCGF1Q9BSM1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCGF1Q9BSM1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.77■□□□□ 0.92
PCGF1Q9BSM1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms