Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A7Q99884 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A7Q99884 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC6A7Q99884 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC6A7Q99884 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A7Q99884 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC6A7Q99884 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A7Q99884 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A7Q99884 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A7Q99884 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A7Q99884 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A7Q99884 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A7Q99884 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 AL449106.1-201ENST00000608517 1980 ntBASIC21.63■■□□□ 1.05
SLC6A7Q99884 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A7Q99884 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC6A7Q99884 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A7Q99884 LINC01003-201ENST00000564834 1764 ntBASIC21.62■■□□□ 1.05
SLC6A7Q99884 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A7Q99884 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A7Q99884 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A7Q99884 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A7Q99884 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A7Q99884 AP004833.2-201ENST00000532228 1454 ntBASIC21.6■■□□□ 1.05
SLC6A7Q99884 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A7Q99884 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC6A7Q99884 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A7Q99884 MIR639-201ENST00000384974 98 ntBASIC21.59■■□□□ 1.05
SLC6A7Q99884 MIR4449-201ENST00000578365 66 ntBASIC21.59■■□□□ 1.05
SLC6A7Q99884 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A7Q99884 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A7Q99884 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A7Q99884 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC6A7Q99884 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.58■■□□□ 1.05
SLC6A7Q99884 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A7Q99884 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A7Q99884 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A7Q99884 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC6A7Q99884 AC016575.1-201ENST00000607026 382 ntBASIC21.56■■□□□ 1.04
SLC6A7Q99884 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A7Q99884 MIR3648-2-201ENST00000581792 180 ntBASIC21.55■■□□□ 1.04
SLC6A7Q99884 MIR3648-1-201ENST00000615959 180 ntBASIC21.55■■□□□ 1.04
SLC6A7Q99884 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A7Q99884 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A7Q99884 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
SLC6A7Q99884 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A7Q99884 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L11-201ENST00000611504 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L12-201ENST00000614593 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 LINC01971-201ENST00000617888 1048 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 DUX4L14-201ENST00000621227 1267 ntBASIC21.53■■□□□ 1.04
SLC6A7Q99884 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SLC6A7Q99884 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A7Q99884 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SLC6A7Q99884 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms