Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BBS4Q96RK4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.74■■□□□ 1.39
BBS4Q96RK4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.74■■□□□ 1.39
BBS4Q96RK4 LINC01971-201ENST00000617888 1048 ntBASIC23.74■■□□□ 1.39
BBS4Q96RK4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BBS4Q96RK4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.73■■□□□ 1.39
BBS4Q96RK4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BBS4Q96RK4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BBS4Q96RK4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BBS4Q96RK4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BBS4Q96RK4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BBS4Q96RK4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
BBS4Q96RK4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
BBS4Q96RK4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BBS4Q96RK4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
BBS4Q96RK4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
BBS4Q96RK4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BBS4Q96RK4 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.7■■□□□ 1.38
BBS4Q96RK4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.7■■□□□ 1.38
BBS4Q96RK4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BBS4Q96RK4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
BBS4Q96RK4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BBS4Q96RK4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.69■■□□□ 1.38
BBS4Q96RK4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BBS4Q96RK4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.69■■□□□ 1.38
BBS4Q96RK4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
BBS4Q96RK4 ZNRF2P2-203ENST00000454624 420 ntBASIC23.68■■□□□ 1.38
BBS4Q96RK4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.68■■□□□ 1.38
BBS4Q96RK4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
BBS4Q96RK4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
BBS4Q96RK4 AL121749.1-202ENST00000609313 2153 ntBASIC23.67■■□□□ 1.38
BBS4Q96RK4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.67■■□□□ 1.38
BBS4Q96RK4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
BBS4Q96RK4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BBS4Q96RK4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.66■■□□□ 1.38
BBS4Q96RK4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BBS4Q96RK4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BBS4Q96RK4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BBS4Q96RK4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.65■■□□□ 1.38
BBS4Q96RK4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BBS4Q96RK4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
BBS4Q96RK4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
BBS4Q96RK4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.64■■□□□ 1.38
BBS4Q96RK4 DUX4L11-201ENST00000611504 1267 ntBASIC23.64■■□□□ 1.37
BBS4Q96RK4 DUX4L12-201ENST00000614593 1267 ntBASIC23.64■■□□□ 1.37
BBS4Q96RK4 DUX4L14-201ENST00000621227 1267 ntBASIC23.64■■□□□ 1.37
BBS4Q96RK4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BBS4Q96RK4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BBS4Q96RK4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
BBS4Q96RK4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L13-201ENST00000554103 1267 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L15-201ENST00000611059 1267 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L23-201ENST00000615195 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L24-201ENST00000617576 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L22-201ENST00000618238 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L20-201ENST00000619712 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L21-201ENST00000622058 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L10-201ENST00000622460 1267 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 DUX4L25-201ENST00000624915 1269 ntBASIC23.63■■□□□ 1.37
BBS4Q96RK4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BBS4Q96RK4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BBS4Q96RK4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
BBS4Q96RK4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
BBS4Q96RK4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BBS4Q96RK4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BBS4Q96RK4 ABHD17AP4-201ENST00000411545 909 ntBASIC23.62■■□□□ 1.37
BBS4Q96RK4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
BBS4Q96RK4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
BBS4Q96RK4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
BBS4Q96RK4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BBS4Q96RK4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
BBS4Q96RK4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BBS4Q96RK4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
BBS4Q96RK4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.6■■□□□ 1.37
BBS4Q96RK4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BBS4Q96RK4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BBS4Q96RK4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BBS4Q96RK4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
BBS4Q96RK4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
BBS4Q96RK4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BBS4Q96RK4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
BBS4Q96RK4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
BBS4Q96RK4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
BBS4Q96RK4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BBS4Q96RK4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.57■■□□□ 1.36
BBS4Q96RK4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
BBS4Q96RK4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.57■■□□□ 1.36
BBS4Q96RK4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BBS4Q96RK4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms