Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.78■■□□□ 1.08
CSMD1Q96PZ7 MIR638-201ENST00000385237 100 ntBASIC21.78■■□□□ 1.08
CSMD1Q96PZ7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSMD1Q96PZ7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSMD1Q96PZ7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CSMD1Q96PZ7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSMD1Q96PZ7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CSMD1Q96PZ7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CSMD1Q96PZ7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSMD1Q96PZ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.76■■□□□ 1.07
CSMD1Q96PZ7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSMD1Q96PZ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSMD1Q96PZ7 AC009831.1-201ENST00000580420 1582 ntBASIC21.75■■□□□ 1.07
CSMD1Q96PZ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSMD1Q96PZ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSMD1Q96PZ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.74■■□□□ 1.07
CSMD1Q96PZ7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.74■■□□□ 1.07
CSMD1Q96PZ7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSMD1Q96PZ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.74■■□□□ 1.07
CSMD1Q96PZ7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSMD1Q96PZ7 AC110285.7-201ENST00000624417 1536 ntBASIC21.73■■□□□ 1.07
CSMD1Q96PZ7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.73■■□□□ 1.07
CSMD1Q96PZ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CSMD1Q96PZ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 AC133552.2-201ENST00000619106 1032 ntBASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.72■■□□□ 1.07
CSMD1Q96PZ7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSMD1Q96PZ7 AL161658.1-201ENST00000623641 1967 ntBASIC21.7■■□□□ 1.07
CSMD1Q96PZ7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.7■■□□□ 1.06
CSMD1Q96PZ7 AC008406.3-201ENST00000620001 1374 ntBASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.69■■□□□ 1.06
CSMD1Q96PZ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSMD1Q96PZ7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.68■■□□□ 1.06
CSMD1Q96PZ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.68■■□□□ 1.06
CSMD1Q96PZ7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSMD1Q96PZ7 AC135983.2-203ENST00000454486 1613 ntBASIC21.68■■□□□ 1.06
CSMD1Q96PZ7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSMD1Q96PZ7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSMD1Q96PZ7 SMPD5-203ENST00000639008 1464 ntBASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.66■■□□□ 1.06
CSMD1Q96PZ7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSMD1Q96PZ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.65■■□□□ 1.06
CSMD1Q96PZ7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CSMD1Q96PZ7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
CSMD1Q96PZ7 SPCS2P3-201ENST00000500401 656 ntBASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSMD1Q96PZ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CSMD1Q96PZ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 AC103724.3-201ENST00000564481 992 ntBASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.62■■□□□ 1.05
CSMD1Q96PZ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 BHLHE23-202ENST00000612929 1109 ntBASIC21.61■■□□□ 1.05
CSMD1Q96PZ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSMD1Q96PZ7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSMD1Q96PZ7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms