Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.69■■□□□ 1.54
PDLIM5Q96HC4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 LINC01971-201ENST00000617888 1048 ntBASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDLIM5Q96HC4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.67■■□□□ 1.54
PDLIM5Q96HC4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
PDLIM5Q96HC4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.66■■□□□ 1.54
PDLIM5Q96HC4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PDLIM5Q96HC4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDLIM5Q96HC4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM5Q96HC4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDLIM5Q96HC4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PDLIM5Q96HC4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PDLIM5Q96HC4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.65■■□□□ 1.54
PDLIM5Q96HC4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.64■■□□□ 1.54
PDLIM5Q96HC4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.64■■□□□ 1.54
PDLIM5Q96HC4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PDLIM5Q96HC4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PDLIM5Q96HC4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDLIM5Q96HC4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDLIM5Q96HC4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDLIM5Q96HC4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDLIM5Q96HC4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.62■■□□□ 1.53
PDLIM5Q96HC4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDLIM5Q96HC4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.62■■□□□ 1.53
PDLIM5Q96HC4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.62■■□□□ 1.53
PDLIM5Q96HC4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.61■■□□□ 1.53
PDLIM5Q96HC4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDLIM5Q96HC4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDLIM5Q96HC4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L13-201ENST00000554103 1267 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L15-201ENST00000611059 1267 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L23-201ENST00000615195 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L24-201ENST00000617576 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L22-201ENST00000618238 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L20-201ENST00000619712 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L21-201ENST00000622058 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L10-201ENST00000622460 1267 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 DUX4L25-201ENST00000624915 1269 ntBASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PDLIM5Q96HC4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDLIM5Q96HC4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.58■■□□□ 1.53
PDLIM5Q96HC4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.58■■□□□ 1.53
PDLIM5Q96HC4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDLIM5Q96HC4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
PDLIM5Q96HC4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
PDLIM5Q96HC4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDLIM5Q96HC4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDLIM5Q96HC4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.56■■□□□ 1.52
PDLIM5Q96HC4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.55■■□□□ 1.52
PDLIM5Q96HC4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 ZNRF2P2-203ENST00000454624 420 ntBASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 DUX4L11-201ENST00000611504 1267 ntBASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 DUX4L12-201ENST00000614593 1267 ntBASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 DUX4L14-201ENST00000621227 1267 ntBASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.54■■□□□ 1.52
PDLIM5Q96HC4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDLIM5Q96HC4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.53■■□□□ 1.52
PDLIM5Q96HC4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDLIM5Q96HC4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PDLIM5Q96HC4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDLIM5Q96HC4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.52■■□□□ 1.52
PDLIM5Q96HC4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDLIM5Q96HC4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PDLIM5Q96HC4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDLIM5Q96HC4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDLIM5Q96HC4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM5Q96HC4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.49■■□□□ 1.51
PDLIM5Q96HC4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM5Q96HC4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM5Q96HC4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PDLIM5Q96HC4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms