Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX1Q92499 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
DDX1Q92499 AL121749.1-202ENST00000609313 2153 ntBASIC26.94■■□□□ 1.9
DDX1Q92499 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
DDX1Q92499 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX1Q92499 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX1Q92499 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.92■■□□□ 1.9
DDX1Q92499 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.92■■□□□ 1.9
DDX1Q92499 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX1Q92499 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
DDX1Q92499 AC110285.7-201ENST00000624417 1536 ntBASIC26.9■■□□□ 1.9
DDX1Q92499 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DDX1Q92499 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.9■■□□□ 1.9
DDX1Q92499 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX1Q92499 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.89■■□□□ 1.89
DDX1Q92499 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX1Q92499 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
DDX1Q92499 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
DDX1Q92499 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.87■■□□□ 1.89
DDX1Q92499 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX1Q92499 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX1Q92499 MIR3648-2-201ENST00000581792 180 ntBASIC26.86■■□□□ 1.89
DDX1Q92499 MIR3648-1-201ENST00000615959 180 ntBASIC26.86■■□□□ 1.89
DDX1Q92499 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
DDX1Q92499 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
DDX1Q92499 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX1Q92499 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX1Q92499 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
DDX1Q92499 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX1Q92499 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.84■■□□□ 1.89
DDX1Q92499 AC016575.1-201ENST00000607026 382 ntBASIC26.84■■□□□ 1.89
DDX1Q92499 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.84■■□□□ 1.89
DDX1Q92499 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
DDX1Q92499 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
DDX1Q92499 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DDX1Q92499 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
DDX1Q92499 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX1Q92499 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX1Q92499 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX1Q92499 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.83■■□□□ 1.89
DDX1Q92499 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
DDX1Q92499 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX1Q92499 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.83■■□□□ 1.89
DDX1Q92499 LINC01971-201ENST00000617888 1048 ntBASIC26.83■■□□□ 1.89
DDX1Q92499 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX1Q92499 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.82■■□□□ 1.88
DDX1Q92499 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.82■■□□□ 1.88
DDX1Q92499 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX1Q92499 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX1Q92499 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.81■■□□□ 1.88
DDX1Q92499 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX1Q92499 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX1Q92499 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.81■■□□□ 1.88
DDX1Q92499 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX1Q92499 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX1Q92499 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
DDX1Q92499 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.8■■□□□ 1.88
DDX1Q92499 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX1Q92499 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX1Q92499 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
DDX1Q92499 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX1Q92499 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
DDX1Q92499 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
DDX1Q92499 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX1Q92499 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.79■■□□□ 1.88
DDX1Q92499 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX1Q92499 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX1Q92499 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX1Q92499 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.78■■□□□ 1.88
DDX1Q92499 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.78■■□□□ 1.88
DDX1Q92499 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
DDX1Q92499 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.77■■□□□ 1.88
DDX1Q92499 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX1Q92499 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX1Q92499 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX1Q92499 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX1Q92499 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.77■■□□□ 1.88
DDX1Q92499 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX1Q92499 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX1Q92499 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX1Q92499 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX1Q92499 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
DDX1Q92499 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX1Q92499 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX1Q92499 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
DDX1Q92499 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX1Q92499 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
DDX1Q92499 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
DDX1Q92499 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX1Q92499 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L13-201ENST00000554103 1267 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L15-201ENST00000611059 1267 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L23-201ENST00000615195 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L24-201ENST00000617576 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L22-201ENST00000618238 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L20-201ENST00000619712 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L21-201ENST00000622058 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L10-201ENST00000622460 1267 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 DUX4L25-201ENST00000624915 1269 ntBASIC26.73■■□□□ 1.87
DDX1Q92499 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms