Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.03■■□□□ 1.44
TRIML2Q8N7C3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIML2Q8N7C3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIML2Q8N7C3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIML2Q8N7C3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.01■■□□□ 1.43
TRIML2Q8N7C3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIML2Q8N7C3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.01■■□□□ 1.43
TRIML2Q8N7C3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24■■□□□ 1.43
TRIML2Q8N7C3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIML2Q8N7C3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIML2Q8N7C3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIML2Q8N7C3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24■■□□□ 1.43
TRIML2Q8N7C3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
TRIML2Q8N7C3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 AP002414.2-202ENST00000590929 1450 ntBASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIML2Q8N7C3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIML2Q8N7C3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.97■■□□□ 1.43
TRIML2Q8N7C3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIML2Q8N7C3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIML2Q8N7C3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.97■■□□□ 1.43
TRIML2Q8N7C3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIML2Q8N7C3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.96■■□□□ 1.43
TRIML2Q8N7C3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.96■■□□□ 1.43
TRIML2Q8N7C3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIML2Q8N7C3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIML2Q8N7C3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIML2Q8N7C3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
TRIML2Q8N7C3 MIR3665-201ENST00000578708 105 ntBASIC23.95■■□□□ 1.42
TRIML2Q8N7C3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIML2Q8N7C3 AC135983.2-203ENST00000454486 1613 ntBASIC23.95■■□□□ 1.42
TRIML2Q8N7C3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIML2Q8N7C3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIML2Q8N7C3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIML2Q8N7C3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIML2Q8N7C3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRIML2Q8N7C3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIML2Q8N7C3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIML2Q8N7C3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TRIML2Q8N7C3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIML2Q8N7C3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 DUX4L28-201ENST00000623687 678 ntBASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIML2Q8N7C3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIML2Q8N7C3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIML2Q8N7C3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIML2Q8N7C3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML2Q8N7C3 MIR6090-201ENST00000622481 60 ntBASIC23.9■■□□□ 1.42
TRIML2Q8N7C3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIML2Q8N7C3 AP006261.1-201ENST00000584783 668 ntBASIC23.89■■□□□ 1.41
TRIML2Q8N7C3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIML2Q8N7C3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TRIML2Q8N7C3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML2Q8N7C3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.88■■□□□ 1.41
TRIML2Q8N7C3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML2Q8N7C3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML2Q8N7C3 LINC00273-201ENST00000539813 1452 ntBASIC23.87■■□□□ 1.41
TRIML2Q8N7C3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML2Q8N7C3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 WHAMMP2-203ENST00000563942 1603 ntBASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIML2Q8N7C3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TRIML2Q8N7C3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TRIML2Q8N7C3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML2Q8N7C3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIML2Q8N7C3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIML2Q8N7C3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIML2Q8N7C3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIML2Q8N7C3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.83■■□□□ 1.4
TRIML2Q8N7C3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIML2Q8N7C3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIML2Q8N7C3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms