Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCUBE1Q8IWY4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCUBE1Q8IWY4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCUBE1Q8IWY4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCUBE1Q8IWY4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SCUBE1Q8IWY4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCUBE1Q8IWY4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCUBE1Q8IWY4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.66■■□□□ 1.54
SCUBE1Q8IWY4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCUBE1Q8IWY4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCUBE1Q8IWY4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCUBE1Q8IWY4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCUBE1Q8IWY4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCUBE1Q8IWY4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCUBE1Q8IWY4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.63■■□□□ 1.53
SCUBE1Q8IWY4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCUBE1Q8IWY4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCUBE1Q8IWY4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCUBE1Q8IWY4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCUBE1Q8IWY4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCUBE1Q8IWY4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.6■■□□□ 1.53
SCUBE1Q8IWY4 AC091060.1-201ENST00000623524 1766 ntBASIC24.59■■□□□ 1.53
SCUBE1Q8IWY4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SCUBE1Q8IWY4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.59■■□□□ 1.53
SCUBE1Q8IWY4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCUBE1Q8IWY4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCUBE1Q8IWY4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.58■■□□□ 1.53
SCUBE1Q8IWY4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.58■■□□□ 1.52
SCUBE1Q8IWY4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SCUBE1Q8IWY4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.57■■□□□ 1.52
SCUBE1Q8IWY4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.57■■□□□ 1.52
SCUBE1Q8IWY4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.57■■□□□ 1.52
SCUBE1Q8IWY4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCUBE1Q8IWY4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.56■■□□□ 1.52
SCUBE1Q8IWY4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.56■■□□□ 1.52
SCUBE1Q8IWY4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.55■■□□□ 1.52
SCUBE1Q8IWY4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SCUBE1Q8IWY4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SCUBE1Q8IWY4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
SCUBE1Q8IWY4 AP004833.2-201ENST00000532228 1454 ntBASIC24.55■■□□□ 1.52
SCUBE1Q8IWY4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCUBE1Q8IWY4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCUBE1Q8IWY4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
SCUBE1Q8IWY4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCUBE1Q8IWY4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCUBE1Q8IWY4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SCUBE1Q8IWY4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCUBE1Q8IWY4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCUBE1Q8IWY4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SCUBE1Q8IWY4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCUBE1Q8IWY4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 AC020928.2-201ENST00000588717 2197 ntBASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.5■■□□□ 1.51
SCUBE1Q8IWY4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 DUX4L29-201ENST00000425409 679 ntBASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SCUBE1Q8IWY4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 AC021231.2-201ENST00000594613 730 ntBASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.48■■□□□ 1.51
SCUBE1Q8IWY4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SCUBE1Q8IWY4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCUBE1Q8IWY4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.47■■□□□ 1.51
SCUBE1Q8IWY4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.47■■□□□ 1.51
SCUBE1Q8IWY4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.46■■□□□ 1.51
SCUBE1Q8IWY4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SCUBE1Q8IWY4 AC127502.1-201ENST00000399971 1502 ntBASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms