Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
PPARGC1BQ86YN6 CR559946.2-201ENST00000623684 991 ntBASIC39.57■■■■□ 3.93
PPARGC1BQ86YN6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC39.57■■■■□ 3.92
PPARGC1BQ86YN6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L13-201ENST00000554103 1267 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L15-201ENST00000611059 1267 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L23-201ENST00000615195 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L24-201ENST00000617576 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L22-201ENST00000618238 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L20-201ENST00000619712 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L21-201ENST00000622058 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L10-201ENST00000622460 1267 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 DUX4L25-201ENST00000624915 1269 ntBASIC39.56■■■■□ 3.92
PPARGC1BQ86YN6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
PPARGC1BQ86YN6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
PPARGC1BQ86YN6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC39.55■■■■□ 3.92
PPARGC1BQ86YN6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.55■■■■□ 3.92
PPARGC1BQ86YN6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
PPARGC1BQ86YN6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC39.53■■■■□ 3.92
PPARGC1BQ86YN6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC39.53■■■■□ 3.92
PPARGC1BQ86YN6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC39.51■■■■□ 3.92
PPARGC1BQ86YN6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC39.51■■■■□ 3.92
PPARGC1BQ86YN6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC39.5■■■■□ 3.91
PPARGC1BQ86YN6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC39.49■■■■□ 3.91
PPARGC1BQ86YN6 AC016575.1-201ENST00000607026 382 ntBASIC39.49■■■■□ 3.91
PPARGC1BQ86YN6 AL121749.1-202ENST00000609313 2153 ntBASIC39.49■■■■□ 3.91
PPARGC1BQ86YN6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 AP002414.2-202ENST00000590929 1450 ntBASIC39.48■■■■□ 3.91
PPARGC1BQ86YN6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 MIR3648-2-201ENST00000581792 180 ntBASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 MIR3648-1-201ENST00000615959 180 ntBASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
PPARGC1BQ86YN6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC39.46■■■■□ 3.91
PPARGC1BQ86YN6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC39.46■■■■□ 3.91
PPARGC1BQ86YN6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC39.44■■■■□ 3.9
PPARGC1BQ86YN6 HES6-205ENST00000409356 528 ntTSL 2 BASIC39.44■■■■□ 3.9
PPARGC1BQ86YN6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
PPARGC1BQ86YN6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC39.43■■■■□ 3.9
PPARGC1BQ86YN6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
PPARGC1BQ86YN6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
PPARGC1BQ86YN6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC39.42■■■■□ 3.9
PPARGC1BQ86YN6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC39.41■■■■□ 3.9
PPARGC1BQ86YN6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
PPARGC1BQ86YN6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC39.41■■■■□ 3.9
PPARGC1BQ86YN6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
PPARGC1BQ86YN6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
PPARGC1BQ86YN6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
PPARGC1BQ86YN6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PPARGC1BQ86YN6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.39■■■■□ 3.9
PPARGC1BQ86YN6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC39.38■■■■□ 3.89
PPARGC1BQ86YN6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
PPARGC1BQ86YN6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
PPARGC1BQ86YN6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC39.37■■■■□ 3.89
PPARGC1BQ86YN6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC39.36■■■■□ 3.89
PPARGC1BQ86YN6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC39.36■■■■□ 3.89
PPARGC1BQ86YN6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC39.36■■■■□ 3.89
PPARGC1BQ86YN6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC39.36■■■■□ 3.89
PPARGC1BQ86YN6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
PPARGC1BQ86YN6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
PPARGC1BQ86YN6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC39.35■■■■□ 3.89
PPARGC1BQ86YN6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC39.35■■■■□ 3.89
PPARGC1BQ86YN6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
PPARGC1BQ86YN6 HLA-V-202ENST00000446817 847 ntBASIC39.33■■■■□ 3.89
PPARGC1BQ86YN6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
PPARGC1BQ86YN6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.32■■■■□ 3.89
PPARGC1BQ86YN6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC39.32■■■■□ 3.89
PPARGC1BQ86YN6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC39.31■■■■□ 3.88
PPARGC1BQ86YN6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.31■■■■□ 3.88
PPARGC1BQ86YN6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC39.31■■■■□ 3.88
PPARGC1BQ86YN6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
PPARGC1BQ86YN6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC39.3■■■■□ 3.88
PPARGC1BQ86YN6 LINC01003-201ENST00000564834 1764 ntBASIC39.3■■■■□ 3.88
PPARGC1BQ86YN6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
PPARGC1BQ86YN6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
PPARGC1BQ86YN6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC39.28■■■■□ 3.88
PPARGC1BQ86YN6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC39.27■■■■□ 3.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms