Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.712e-9■■■■■ 33.8
LSM11P83369 PHB2-208ENST00000543465 1518 ntTSL 520.02■□□□□ 0.795e-9■■■■■ 33.5
LSM11P83369 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.9■□□□□ 0.465e-9■■■■■ 33.5
LSM11P83369 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.445e-9■■■■■ 33.5
LSM11P83369 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.315e-9■■■■■ 33.5
LSM11P83369 PHB2-210ENST00000544888 872 ntTSL 316.78■□□□□ 0.285e-9■■■■■ 33.5
LSM11P83369 PHB2-209ENST00000544134 652 ntTSL 316.64■□□□□ 0.255e-9■■■■■ 33.5
LSM11P83369 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.49■□□□□ 0.235e-9■■■■■ 33.5
LSM11P83369 PHB2-214ENST00000546217 628 ntTSL 216.19■□□□□ 0.185e-9■■■■■ 33.5
LSM11P83369 PHB2-211ENST00000545167 908 ntTSL 516.16■□□□□ 0.185e-9■■■■■ 33.5
LSM11P83369 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.08■□□□□ 0.165e-9■■■■■ 33.5
LSM11P83369 PHB2-204ENST00000536316 739 ntTSL 515.29■□□□□ 0.045e-9■■■■■ 33.5
LSM11P83369 KMT2D-203ENST00000547610 636 ntTSL 518.65■□□□□ 0.584e-21■■■■■ 33.4
LSM11P83369 SOS1-204ENST00000451331 579 ntTSL 414.45□□□□□ -0.14e-21■■■■■ 33.4
LSM11P83369 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.464e-21■■■■■ 33.4
LSM11P83369 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.744e-21■■■■■ 33.4
LSM11P83369 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.794e-21■■■■■ 33.4
LSM11P83369 TBCD-225ENST00000576996 827 ntTSL 512.75□□□□□ -0.373e-7■■■■■ 33.3
LSM11P83369 TBCD-214ENST00000574801 586 ntTSL 411.66□□□□□ -0.543e-7■■■■■ 33.3
LSM11P83369 TBCD-219ENST00000576160 942 ntTSL 510.41□□□□□ -0.743e-7■■■■■ 33.3
LSM11P83369 TBCD-206ENST00000571712 850 ntTSL 59.51□□□□□ -0.893e-7■■■■■ 33.3
LSM11P83369 HIST4H4-205ENST00000540565 577 ntTSL 310.88□□□□□ -0.674e-11■■■■■ 32.9
LSM11P83369 HSDL1-205ENST00000565275 533 ntTSL 28.7□□□□□ -1.028e-7■■■■■ 32.8
LSM11P83369 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.338e-7■■■■■ 32.8
LSM11P83369 RAC3-204ENST00000585014 798 ntTSL 216.58■□□□□ 0.248e-7■■■■■ 32.8
LSM11P83369 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.91■□□□□ 0.621e-7■■■■■ 32.8
LSM11P83369 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.541e-7■■■■■ 32.8
LSM11P83369 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.57■□□□□ 0.41e-7■■■■■ 32.8
LSM11P83369 CHD1L-209ENST00000492728 662 ntTSL 215.94■□□□□ 0.141e-7■■■■■ 32.8
LSM11P83369 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.21■□□□□ 0.031e-7■■■■■ 32.8
LSM11P83369 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.79□□□□□ -0.041e-7■■■■■ 32.8
LSM11P83369 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.081e-7■■■■■ 32.8
LSM11P83369 CHD1L-205ENST00000467213 2782 ntTSL 1 (best)14.54□□□□□ -0.081e-7■■■■■ 32.8
LSM11P83369 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.44□□□□□ -0.11e-7■■■■■ 32.8
LSM11P83369 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.11e-7■■■■■ 32.8
LSM11P83369 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.34□□□□□ -0.111e-7■■■■■ 32.8
LSM11P83369 PDLIM5-212ENST00000509333 743 ntTSL 214.09□□□□□ -0.151e-7■■■■■ 32.8
LSM11P83369 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.161e-7■■■■■ 32.8
LSM11P83369 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.57□□□□□ -0.241e-7■■■■■ 32.8
LSM11P83369 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.39□□□□□ -0.271e-7■■■■■ 32.8
LSM11P83369 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.24□□□□□ -0.291e-7■■■■■ 32.8
LSM11P83369 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.291e-7■■■■■ 32.8
LSM11P83369 MACROD1-207ENST00000543422 403 ntTSL 313□□□□□ -0.331e-7■■■■■ 32.8
LSM11P83369 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.421e-7■■■■■ 32.8
LSM11P83369 CHD1L-208ENST00000488864 2415 ntTSL 212.29□□□□□ -0.441e-7■■■■■ 32.8
LSM11P83369 CHD1L-210ENST00000622533 2937 ntTSL 512.27□□□□□ -0.451e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-213ENST00000514179 2200 ntTSL 212.16□□□□□ -0.461e-7■■■■■ 32.8
LSM11P83369 FAM172A-205ENST00000506398 965 ntTSL 511.63□□□□□ -0.551e-7■■■■■ 32.8
LSM11P83369 PDLIM5-211ENST00000508531 480 ntTSL 411.37□□□□□ -0.591e-7■■■■■ 32.8
LSM11P83369 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC11.31□□□□□ -0.61e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.611e-7■■■■■ 32.8
LSM11P83369 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC10.92□□□□□ -0.661e-7■■■■■ 32.8
LSM11P83369 PDLIM5-220ENST00000514830 802 ntTSL 210.74□□□□□ -0.691e-7■■■■■ 32.8
LSM11P83369 FAM172A-202ENST00000502503 1392 ntTSL 210.68□□□□□ -0.71e-7■■■■■ 32.8
LSM11P83369 EIF1B-AS1-204ENST00000629217 553 ntTSL 410.68□□□□□ -0.71e-7■■■■■ 32.8
LSM11P83369 PRKCB-207ENST00000486868 467 ntTSL 310.67□□□□□ -0.71e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC10.45□□□□□ -0.741e-7■■■■■ 32.8
LSM11P83369 PDLIM5-218ENST00000513341 794 ntTSL 310.42□□□□□ -0.741e-7■■■■■ 32.8
LSM11P83369 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC9.88□□□□□ -0.831e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-214ENST00000515170 4103 ntTSL 29.09□□□□□ -0.951e-7■■■■■ 32.8
LSM11P83369 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.961e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.961e-7■■■■■ 32.8
LSM11P83369 FAM172A-203ENST00000504768 803 ntTSL 58.97□□□□□ -0.971e-7■■■■■ 32.8
LSM11P83369 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC8.92□□□□□ -0.981e-7■■■■■ 32.8
LSM11P83369 PDLIM5-223ENST00000627587 1853 ntTSL 28.87□□□□□ -0.991e-7■■■■■ 32.8
LSM11P83369 EIF1B-AS1-203ENST00000628298 498 ntTSL 28.43□□□□□ -1.061e-7■■■■■ 32.8
LSM11P83369 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC8.19□□□□□ -1.11e-7■■■■■ 32.8
LSM11P83369 PDLIM5-213ENST00000509357 554 ntTSL 57.81□□□□□ -1.161e-7■■■■■ 32.8
LSM11P83369 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.21e-7■■■■■ 32.8
LSM11P83369 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.251e-7■■■■■ 32.8
LSM11P83369 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.92□□□□□ -1.31e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.351e-7■■■■■ 32.8
LSM11P83369 PDLIM5-214ENST00000510099 554 ntTSL 45.71□□□□□ -1.51e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.19□□□□□ -1.741e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.791e-7■■■■■ 32.8
LSM11P83369 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91e-7■■■■■ 32.8
LSM11P83369 COL7A1-205ENST00000465238 587 ntTSL 215.61■□□□□ 0.098e-7■■■■■ 32.6
LSM11P83369 COL7A1-208ENST00000470076 651 ntTSL 215.22■□□□□ 0.038e-7■■■■■ 32.6
LSM11P83369 EIF4A1-217ENST00000581384 642 ntTSL 59.18□□□□□ -0.943e-8■■■■■ 32.6
LSM11P83369 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.711e-10■■■■■ 32.4
LSM11P83369 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.441e-10■■■■■ 32.4
LSM11P83369 MIR451A-201ENST00000385059 72 ntBASIC3.16□□□□□ -1.98e-17■■■■■ 32.2
LSM11P83369 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC7.86□□□□□ -1.155e-6■■■■■ 32.1
LSM11P83369 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC10.78□□□□□ -0.682e-16■■■■■ 31.9
LSM11P83369 HIST1H3D-203ENST00000635641 1637 ntTSL 516.14■□□□□ 0.174e-10■■■■■ 31.9
LSM11P83369 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.184e-10■■■■■ 31.9
LSM11P83369 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.98□□□□□ -0.338e-16■■■■■ 31.9
LSM11P83369 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC10.3□□□□□ -0.768e-16■■■■■ 31.9
LSM11P83369 AC005381.1-202ENST00000592716 574 ntTSL 57.12□□□□□ -1.278e-16■■■■■ 31.9
LSM11P83369 IGF2BP3-204ENST00000466809 588 ntTSL 514.43□□□□□ -0.12e-7■■■■■ 31.8
LSM11P83369 IGF2BP3-211ENST00000479504 559 ntTSL 414.41□□□□□ -0.12e-7■■■■■ 31.8
LSM11P83369 IGF2BP3-214ENST00000492771 564 ntTSL 411.91□□□□□ -0.52e-7■■■■■ 31.8
LSM11P83369 ARFRP1-206ENST00000610774 5178 ntTSL 213.11□□□□□ -0.314e-8■■■■■ 31.8
LSM11P83369 TANGO2-208ENST00000430807 733 ntTSL 319.49■□□□□ 0.718e-9■■■■■ 31.6
LSM11P83369 TANGO2-206ENST00000411907 568 ntTSL 419.03■□□□□ 0.648e-9■■■■■ 31.6
LSM11P83369 TANGO2-211ENST00000434168 862 ntTSL 316.3■□□□□ 0.28e-9■■■■■ 31.6
LSM11P83369 TANGO2-216ENST00000450664 570 ntTSL 415.38■□□□□ 0.058e-9■■■■■ 31.6
LSM11P83369 TANGO2-218ENST00000462579 649 ntTSL 414.23□□□□□ -0.138e-9■■■■■ 31.6
LSM11P83369 TANGO2-224ENST00000485715 617 ntTSL 511.64□□□□□ -0.558e-9■■■■■ 31.6
LSM11P83369 TANGO2-225ENST00000490121 125 ntTSL 39.61□□□□□ -0.878e-9■■■■■ 31.6
Retrieved 100 of 11,495 protein–RNA pairs in 328.4 ms