RNA–Protein interactions for RNA: ENST00000510071.5

RAPGEF6-209, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-209ENST00000510071 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.84
RAPGEF6-209ENST00000510071 HRCP23327 699 aa18.69■□□□□ 0.58
RAPGEF6-209ENST00000510071 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
RAPGEF6-209ENST00000510071 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
RAPGEF6-209ENST00000510071 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
RAPGEF6-209ENST00000510071 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
RAPGEF6-209ENST00000510071 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
RAPGEF6-209ENST00000510071 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
RAPGEF6-209ENST00000510071 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
RAPGEF6-209ENST00000510071 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
RAPGEF6-209ENST00000510071 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
RAPGEF6-209ENST00000510071 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF6-209ENST00000510071 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
RAPGEF6-209ENST00000510071 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
RAPGEF6-209ENST00000510071 MYT1Q01538 1121 aa17.47■□□□□ 0.39
RAPGEF6-209ENST00000510071 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
RAPGEF6-209ENST00000510071 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
RAPGEF6-209ENST00000510071 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
RAPGEF6-209ENST00000510071 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
RAPGEF6-209ENST00000510071 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
RAPGEF6-209ENST00000510071 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
RAPGEF6-209ENST00000510071 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF6-209ENST00000510071 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
RAPGEF6-209ENST00000510071 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF6-209ENST00000510071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF6-209ENST00000510071 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
RAPGEF6-209ENST00000510071 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF6-209ENST00000510071 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
RAPGEF6-209ENST00000510071 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
RAPGEF6-209ENST00000510071 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.26
RAPGEF6-209ENST00000510071 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF6-209ENST00000510071 MIER1Q8N108 512 aa16.54■□□□□ 0.24
RAPGEF6-209ENST00000510071 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF6-209ENST00000510071 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
RAPGEF6-209ENST00000510071 ABCC9O60706 1549 aa16.37■□□□□ 0.21
RAPGEF6-209ENST00000510071 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
RAPGEF6-209ENST00000510071 ANP32EQ9BTT0 268 aa16.36■□□□□ 0.21
RAPGEF6-209ENST00000510071 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
RAPGEF6-209ENST00000510071 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
RAPGEF6-209ENST00000510071 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
RAPGEF6-209ENST00000510071 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
RAPGEF6-209ENST00000510071 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
RAPGEF6-209ENST00000510071 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
RAPGEF6-209ENST00000510071 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 BCANQ96GW7 911 aa16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
RAPGEF6-209ENST00000510071 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
RAPGEF6-209ENST00000510071 FKBP8Q14318 412 aa15.95■□□□□ 0.14
RAPGEF6-209ENST00000510071 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
RAPGEF6-209ENST00000510071 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
RAPGEF6-209ENST00000510071 SOGA1O94964 1423 aa15.91■□□□□ 0.14
RAPGEF6-209ENST00000510071 APLP2Q06481 763 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
RAPGEF6-209ENST00000510071 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF6-209ENST00000510071 ITGAEP38570 1179 aa15.85■□□□□ 0.13
RAPGEF6-209ENST00000510071 NEFLP07196 543 aa15.84■□□□□ 0.13
RAPGEF6-209ENST00000510071 WIZO95785 1651 aa15.83■□□□□ 0.13
RAPGEF6-209ENST00000510071 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
RAPGEF6-209ENST00000510071 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
RAPGEF6-209ENST00000510071 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF6-209ENST00000510071 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
RAPGEF6-209ENST00000510071 MSH5O43196 834 aa15.74■□□□□ 0.11
RAPGEF6-209ENST00000510071 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
RAPGEF6-209ENST00000510071 CLIP1P30622 1438 aa15.7■□□□□ 0.1
RAPGEF6-209ENST00000510071 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
RAPGEF6-209ENST00000510071 EEA1Q15075 1411 aa15.69■□□□□ 0.1
RAPGEF6-209ENST00000510071 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
RAPGEF6-209ENST00000510071 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
RAPGEF6-209ENST00000510071 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF6-209ENST00000510071 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
RAPGEF6-209ENST00000510071 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF6-209ENST00000510071 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF6-209ENST00000510071 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
RAPGEF6-209ENST00000510071 DEKP35659 375 aaKnown RBP15.55■□□□□ 0.08
RAPGEF6-209ENST00000510071 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
RAPGEF6-209ENST00000510071 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF6-209ENST00000510071 ANP32CO43423 234 aa15.5■□□□□ 0.07
RAPGEF6-209ENST00000510071 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF6-209ENST00000510071 NACADO15069 1562 aa15.48■□□□□ 0.07
RAPGEF6-209ENST00000510071 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
RAPGEF6-209ENST00000510071 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
RAPGEF6-209ENST00000510071 NBR1Q14596 966 aa15.46■□□□□ 0.06
RAPGEF6-209ENST00000510071 ANO8Q9HCE9 1232 aaPredicted RBP15.45■□□□□ 0.06
RAPGEF6-209ENST00000510071 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
RAPGEF6-209ENST00000510071 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
RAPGEF6-209ENST00000510071 KIF21BO75037 1637 aa15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 CCER2I3L3R5 266 aa15.41■□□□□ 0.06
RAPGEF6-209ENST00000510071 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
RAPGEF6-209ENST00000510071 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
RAPGEF6-209ENST00000510071 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
RAPGEF6-209ENST00000510071 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
RAPGEF6-209ENST00000510071 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
RAPGEF6-209ENST00000510071 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
RAPGEF6-209ENST00000510071 RRBP1Q9P2E9 1410 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms