RNA–Protein interactions for RNA: ENST00000506398.6

FAM172A-205, Transcript of family with sequence similarity 172 member A, humanhuman

TSL 5

Gene FAM172A, Length 965 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-205ENST00000506398 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
FAM172A-205ENST00000506398 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
FAM172A-205ENST00000506398 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
FAM172A-205ENST00000506398 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
FAM172A-205ENST00000506398 FOXD1Q16676 465 aa22.32■■□□□ 1.16
FAM172A-205ENST00000506398 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
FAM172A-205ENST00000506398 MSH5O43196 834 aa21.26■□□□□ 0.99
FAM172A-205ENST00000506398 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
FAM172A-205ENST00000506398 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
FAM172A-205ENST00000506398 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
FAM172A-205ENST00000506398 ADRA2BP18089 450 aa20.06■□□□□ 0.8
FAM172A-205ENST00000506398 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
FAM172A-205ENST00000506398 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
FAM172A-205ENST00000506398 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
FAM172A-205ENST00000506398 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
FAM172A-205ENST00000506398 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
FAM172A-205ENST00000506398 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
FAM172A-205ENST00000506398 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
FAM172A-205ENST00000506398 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
FAM172A-205ENST00000506398 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
FAM172A-205ENST00000506398 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
FAM172A-205ENST00000506398 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
FAM172A-205ENST00000506398 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
FAM172A-205ENST00000506398 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
FAM172A-205ENST00000506398 POTEHQ6S545 545 aa17.17■□□□□ 0.34
FAM172A-205ENST00000506398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
FAM172A-205ENST00000506398 DSG3P32926 999 aa16.61■□□□□ 0.25
FAM172A-205ENST00000506398 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
FAM172A-205ENST00000506398 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
FAM172A-205ENST00000506398 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
FAM172A-205ENST00000506398 CAPN15O75808 1086 aa16.43■□□□□ 0.22
FAM172A-205ENST00000506398 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
FAM172A-205ENST00000506398 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
FAM172A-205ENST00000506398 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
FAM172A-205ENST00000506398 ABCB7O75027 752 aa15.95■□□□□ 0.14
FAM172A-205ENST00000506398 APLP2Q06481 763 aa15.95■□□□□ 0.14
FAM172A-205ENST00000506398 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
FAM172A-205ENST00000506398 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
FAM172A-205ENST00000506398 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
FAM172A-205ENST00000506398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
FAM172A-205ENST00000506398 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
FAM172A-205ENST00000506398 SP7Q8TDD2 431 aaPredicted RBP15.71■□□□□ 0.11
FAM172A-205ENST00000506398 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
FAM172A-205ENST00000506398 POLA2Q14181 598 aa15.37■□□□□ 0.05
FAM172A-205ENST00000506398 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
FAM172A-205ENST00000506398 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
FAM172A-205ENST00000506398 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
FAM172A-205ENST00000506398 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
FAM172A-205ENST00000506398 KCNA4P22459 653 aa15.22■□□□□ 0.03
FAM172A-205ENST00000506398 HAX1O00165 279 aa15.17■□□□□ 0.02
FAM172A-205ENST00000506398 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
FAM172A-205ENST00000506398 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
FAM172A-205ENST00000506398 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
FAM172A-205ENST00000506398 HRCP23327 699 aa15.08■□□□□ 0
FAM172A-205ENST00000506398 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
FAM172A-205ENST00000506398 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
FAM172A-205ENST00000506398 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
FAM172A-205ENST00000506398 PITPNM1O00562 1244 aa15.01□□□□□ -0.01
FAM172A-205ENST00000506398 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
FAM172A-205ENST00000506398 EVX2Q03828 476 aa14.95□□□□□ -0.02
FAM172A-205ENST00000506398 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
FAM172A-205ENST00000506398 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
FAM172A-205ENST00000506398 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
FAM172A-205ENST00000506398 LHX8Q68G74 356 aa14.7□□□□□ -0.06
FAM172A-205ENST00000506398 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
FAM172A-205ENST00000506398 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
FAM172A-205ENST00000506398 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
FAM172A-205ENST00000506398 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
FAM172A-205ENST00000506398 TRIM26Q12899 539 aaPredicted RBP14.59□□□□□ -0.07
FAM172A-205ENST00000506398 GABBR2O75899 941 aa14.58□□□□□ -0.08
FAM172A-205ENST00000506398 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
FAM172A-205ENST00000506398 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
FAM172A-205ENST00000506398 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
FAM172A-205ENST00000506398 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
FAM172A-205ENST00000506398 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
FAM172A-205ENST00000506398 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
FAM172A-205ENST00000506398 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
FAM172A-205ENST00000506398 ABCC9O60706 1549 aa14.4□□□□□ -0.1
FAM172A-205ENST00000506398 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
FAM172A-205ENST00000506398 PLSCR2Q9NRY7 297 aa14.37□□□□□ -0.11
FAM172A-205ENST00000506398 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
FAM172A-205ENST00000506398 PPARGC1BQ86YN6 1023 aaKnown RBP14.34□□□□□ -0.11
FAM172A-205ENST00000506398 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
FAM172A-205ENST00000506398 FBLN2P98095 1184 aa14.28□□□□□ -0.12
FAM172A-205ENST00000506398 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
FAM172A-205ENST00000506398 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
FAM172A-205ENST00000506398 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
FAM172A-205ENST00000506398 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
FAM172A-205ENST00000506398 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
FAM172A-205ENST00000506398 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
FAM172A-205ENST00000506398 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
FAM172A-205ENST00000506398 CLCN6P51797 869 aa14.18□□□□□ -0.14
FAM172A-205ENST00000506398 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
FAM172A-205ENST00000506398 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
FAM172A-205ENST00000506398 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
FAM172A-205ENST00000506398 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
FAM172A-205ENST00000506398 NACADO15069 1562 aa14.05□□□□□ -0.16
FAM172A-205ENST00000506398 MYT1Q01538 1121 aa14.02□□□□□ -0.17
FAM172A-205ENST00000506398 ZBTB22O15209 634 aa13.99□□□□□ -0.17
FAM172A-205ENST00000506398 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms