RNA–Protein interactions for RNA: ENST00000514179.5

RAPGEF6-213, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 2,200 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-213ENST00000514179 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
RAPGEF6-213ENST00000514179 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
RAPGEF6-213ENST00000514179 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
RAPGEF6-213ENST00000514179 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
RAPGEF6-213ENST00000514179 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
RAPGEF6-213ENST00000514179 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
RAPGEF6-213ENST00000514179 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
RAPGEF6-213ENST00000514179 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
RAPGEF6-213ENST00000514179 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
RAPGEF6-213ENST00000514179 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
RAPGEF6-213ENST00000514179 ABCC9O60706 1549 aa21.64■■□□□ 1.05
RAPGEF6-213ENST00000514179 NACADO15069 1562 aa21.47■■□□□ 1.03
RAPGEF6-213ENST00000514179 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF6-213ENST00000514179 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
RAPGEF6-213ENST00000514179 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
RAPGEF6-213ENST00000514179 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
RAPGEF6-213ENST00000514179 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
RAPGEF6-213ENST00000514179 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
RAPGEF6-213ENST00000514179 HRCP23327 699 aa21.02■□□□□ 0.96
RAPGEF6-213ENST00000514179 WIZO95785 1651 aa20.99■□□□□ 0.95
RAPGEF6-213ENST00000514179 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
RAPGEF6-213ENST00000514179 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF6-213ENST00000514179 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
RAPGEF6-213ENST00000514179 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
RAPGEF6-213ENST00000514179 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
RAPGEF6-213ENST00000514179 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF6-213ENST00000514179 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
RAPGEF6-213ENST00000514179 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
RAPGEF6-213ENST00000514179 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
RAPGEF6-213ENST00000514179 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
RAPGEF6-213ENST00000514179 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
RAPGEF6-213ENST00000514179 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
RAPGEF6-213ENST00000514179 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.87
RAPGEF6-213ENST00000514179 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
RAPGEF6-213ENST00000514179 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
RAPGEF6-213ENST00000514179 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
RAPGEF6-213ENST00000514179 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF6-213ENST00000514179 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
RAPGEF6-213ENST00000514179 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
RAPGEF6-213ENST00000514179 SOGA1O94964 1423 aa20.14■□□□□ 0.82
RAPGEF6-213ENST00000514179 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.8
RAPGEF6-213ENST00000514179 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
RAPGEF6-213ENST00000514179 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
RAPGEF6-213ENST00000514179 EEA1Q15075 1411 aa19.99■□□□□ 0.79
RAPGEF6-213ENST00000514179 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
RAPGEF6-213ENST00000514179 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
RAPGEF6-213ENST00000514179 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
RAPGEF6-213ENST00000514179 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
RAPGEF6-213ENST00000514179 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
RAPGEF6-213ENST00000514179 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
RAPGEF6-213ENST00000514179 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
RAPGEF6-213ENST00000514179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
RAPGEF6-213ENST00000514179 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
RAPGEF6-213ENST00000514179 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
RAPGEF6-213ENST00000514179 SLC24A1O60721 1099 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 KIF21BO75037 1637 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
RAPGEF6-213ENST00000514179 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
RAPGEF6-213ENST00000514179 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
RAPGEF6-213ENST00000514179 CUX1P39880 1505 aa19.65■□□□□ 0.74
RAPGEF6-213ENST00000514179 CFTRP13569 1480 aa19.63■□□□□ 0.73
RAPGEF6-213ENST00000514179 CLIP1P30622 1438 aa19.62■□□□□ 0.73
RAPGEF6-213ENST00000514179 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
RAPGEF6-213ENST00000514179 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
RAPGEF6-213ENST00000514179 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.71
RAPGEF6-213ENST00000514179 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
RAPGEF6-213ENST00000514179 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
RAPGEF6-213ENST00000514179 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
RAPGEF6-213ENST00000514179 APLP2Q06481 763 aa19.45■□□□□ 0.7
RAPGEF6-213ENST00000514179 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
RAPGEF6-213ENST00000514179 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
RAPGEF6-213ENST00000514179 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
RAPGEF6-213ENST00000514179 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
RAPGEF6-213ENST00000514179 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
RAPGEF6-213ENST00000514179 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
RAPGEF6-213ENST00000514179 CUX2O14529 1486 aa19.34■□□□□ 0.69
RAPGEF6-213ENST00000514179 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
RAPGEF6-213ENST00000514179 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
RAPGEF6-213ENST00000514179 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
RAPGEF6-213ENST00000514179 IGF1RP08069 1367 aa19.25■□□□□ 0.67
RAPGEF6-213ENST00000514179 NESP48681 1621 aa19.23■□□□□ 0.67
RAPGEF6-213ENST00000514179 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
RAPGEF6-213ENST00000514179 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
RAPGEF6-213ENST00000514179 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
RAPGEF6-213ENST00000514179 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
RAPGEF6-213ENST00000514179 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
RAPGEF6-213ENST00000514179 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
RAPGEF6-213ENST00000514179 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
RAPGEF6-213ENST00000514179 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF6-213ENST00000514179 TOPBP1Q92547 1522 aa19.14■□□□□ 0.66
RAPGEF6-213ENST00000514179 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF6-213ENST00000514179 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
RAPGEF6-213ENST00000514179 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
RAPGEF6-213ENST00000514179 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
RAPGEF6-213ENST00000514179 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
RAPGEF6-213ENST00000514179 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
RAPGEF6-213ENST00000514179 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
RAPGEF6-213ENST00000514179 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
RAPGEF6-213ENST00000514179 TIAM1Q13009 1591 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms