RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
CHD1L-204ENST00000431239 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
CHD1L-204ENST00000431239 CCDC180Q9P1Z9 1646 aa32.6■■■□□ 2.81
CHD1L-204ENST00000431239 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
CHD1L-204ENST00000431239 SUPT5HO00267 1087 aaKnown RBP32.37■■■□□ 2.77
CHD1L-204ENST00000431239 DCAF8L2P0C7V8 631 aa32.24■■■□□ 2.75
CHD1L-204ENST00000431239 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
CHD1L-204ENST00000431239 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
CHD1L-204ENST00000431239 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
CHD1L-204ENST00000431239 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
CHD1L-204ENST00000431239 ABCC9O60706 1549 aa30.66■■■□□ 2.5
CHD1L-204ENST00000431239 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
CHD1L-204ENST00000431239 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
CHD1L-204ENST00000431239 PCGF6Q9BYE7 350 aa30.4■■■□□ 2.46
CHD1L-204ENST00000431239 HRCP23327 699 aa30.22■■■□□ 2.43
CHD1L-204ENST00000431239 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
CHD1L-204ENST00000431239 NACADO15069 1562 aa30.18■■■□□ 2.42
CHD1L-204ENST00000431239 CECR2Q9BXF3 1484 aa30.1■■■□□ 2.41
CHD1L-204ENST00000431239 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
CHD1L-204ENST00000431239 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
CHD1L-204ENST00000431239 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
CHD1L-204ENST00000431239 EHMT2Q96KQ7 1210 aa29.86■■■□□ 2.37
CHD1L-204ENST00000431239 WIZO95785 1651 aa29.82■■■□□ 2.36
CHD1L-204ENST00000431239 PPARGC1BQ86YN6 1023 aaKnown RBP29.8■■■□□ 2.36
CHD1L-204ENST00000431239 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
CHD1L-204ENST00000431239 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
CHD1L-204ENST00000431239 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
CHD1L-204ENST00000431239 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
CHD1L-204ENST00000431239 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
CHD1L-204ENST00000431239 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.272e-6■■□□□ 13.5
CHD1L-204ENST00000431239 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
CHD1L-204ENST00000431239 ABCC8Q09428 1581 aa29.2■■■□□ 2.26
CHD1L-204ENST00000431239 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
CHD1L-204ENST00000431239 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
CHD1L-204ENST00000431239 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
CHD1L-204ENST00000431239 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
CHD1L-204ENST00000431239 SOGA1O94964 1423 aa28.89■■■□□ 2.22
CHD1L-204ENST00000431239 TTBK1Q5TCY1 1321 aaPredicted RBP28.86■■■□□ 2.21
CHD1L-204ENST00000431239 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
CHD1L-204ENST00000431239 CEP162Q5TB80 1403 aa28.71■■■□□ 2.19
CHD1L-204ENST00000431239 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
CHD1L-204ENST00000431239 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
CHD1L-204ENST00000431239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.67■■■□□ 2.18
CHD1L-204ENST00000431239 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
CHD1L-204ENST00000431239 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
CHD1L-204ENST00000431239 TNIKQ9UKE5 1360 aa28.57■■■□□ 2.16
CHD1L-204ENST00000431239 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
CHD1L-204ENST00000431239 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
CHD1L-204ENST00000431239 EEA1Q15075 1411 aa28.54■■■□□ 2.16
CHD1L-204ENST00000431239 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
CHD1L-204ENST00000431239 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
CHD1L-204ENST00000431239 GOLGA3Q08378 1498 aa28.45■■■□□ 2.15
CHD1L-204ENST00000431239 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
CHD1L-204ENST00000431239 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
CHD1L-204ENST00000431239 KIF21BO75037 1637 aa28.19■■■□□ 2.1
CHD1L-204ENST00000431239 CLIP1P30622 1438 aa28.18■■■□□ 2.1
CHD1L-204ENST00000431239 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
CHD1L-204ENST00000431239 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
CHD1L-204ENST00000431239 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CHD1L-204ENST00000431239 VPS8Q8N3P4 1428 aa28■■■□□ 2.07
CHD1L-204ENST00000431239 APLP2Q06481 763 aa27.98■■■□□ 2.07
CHD1L-204ENST00000431239 NCAPD3P42695 1498 aa27.95■■■□□ 2.06
CHD1L-204ENST00000431239 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
CHD1L-204ENST00000431239 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
CHD1L-204ENST00000431239 DIEXFQ68CQ4 756 aaKnown RBP27.9■■■□□ 2.06
CHD1L-204ENST00000431239 CUX1P39880 1505 aa27.88■■■□□ 2.05
CHD1L-204ENST00000431239 SCAF1Q9H7N4 1312 aaKnown RBP27.87■■■□□ 2.05
CHD1L-204ENST00000431239 PRXQ9BXM0 1461 aa27.79■■■□□ 2.04
CHD1L-204ENST00000431239 CFTRP13569 1480 aa27.75■■■□□ 2.03
CHD1L-204ENST00000431239 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
CHD1L-204ENST00000431239 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
CHD1L-204ENST00000431239 ARAP1Q96P48 1450 aa27.7■■■□□ 2.03
CHD1L-204ENST00000431239 ZNF316A6NFI3 1004 aaPredicted RBP27.66■■■□□ 2.02
CHD1L-204ENST00000431239 KANK4Q5T7N3 995 aaPredicted RBP27.65■■■□□ 2.02
CHD1L-204ENST00000431239 NEUROD1Q13562 356 aa27.63■■■□□ 2.01
CHD1L-204ENST00000431239 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
CHD1L-204ENST00000431239 CUX2O14529 1486 aa27.54■■■□□ 2
CHD1L-204ENST00000431239 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
CHD1L-204ENST00000431239 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
CHD1L-204ENST00000431239 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
CHD1L-204ENST00000431239 CENPBP07199 599 aaPredicted RBP27.43■■□□□ 1.98
CHD1L-204ENST00000431239 IGF1RP08069 1367 aa27.43■■□□□ 1.98
CHD1L-204ENST00000431239 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
CHD1L-204ENST00000431239 YTHDC1Q96MU7 727 aaKnown RBP27.42■■□□□ 1.98
CHD1L-204ENST00000431239 ITGAEP38570 1179 aa27.41■■□□□ 1.98
CHD1L-204ENST00000431239 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
CHD1L-204ENST00000431239 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
CHD1L-204ENST00000431239 GTF3C3Q9Y5Q9 886 aa27.34■■□□□ 1.97
CHD1L-204ENST00000431239 DHX57Q6P158 1386 aaKnown RBP27.34■■□□□ 1.97
CHD1L-204ENST00000431239 MIER1Q8N108 512 aa27.34■■□□□ 1.97
CHD1L-204ENST00000431239 RRBP1Q9P2E9 1410 aaKnown RBP27.29■■□□□ 1.96
CHD1L-204ENST00000431239 P3H3Q8IVL6 736 aa27.28■■□□□ 1.96
CHD1L-204ENST00000431239 CCNB3Q8WWL7 1395 aa27.27■■□□□ 1.96
CHD1L-204ENST00000431239 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
CHD1L-204ENST00000431239 ATP1B4Q9UN42 357 aaPredicted RBP27.22■■□□□ 1.95
CHD1L-204ENST00000431239 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.94
CHD1L-204ENST00000431239 NESP48681 1621 aa27.19■■□□□ 1.94
CHD1L-204ENST00000431239 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
CHD1L-204ENST00000431239 TIAM1Q13009 1591 aa27.14■■□□□ 1.94
CHD1L-204ENST00000431239 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms