RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
RAPGEF6-201ENST00000296859 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
RAPGEF6-201ENST00000296859 AEBP2Q6ZN18 517 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF6-201ENST00000296859 EHMT2Q96KQ7 1210 aa7.03□□□□□ -1.28
RAPGEF6-201ENST00000296859 CHIC1Q5VXU3 224 aa6.93□□□□□ -1.3
RAPGEF6-201ENST00000296859 MYT1LQ9UL68 1186 aa6.88□□□□□ -1.31
RAPGEF6-201ENST00000296859 APLP2Q06481 763 aa6.84□□□□□ -1.31
RAPGEF6-201ENST00000296859 ATP1B4Q9UN42 357 aaPredicted RBP6.83□□□□□ -1.32
RAPGEF6-201ENST00000296859 USP34Q70CQ2 3546 aa6.81□□□□□ -1.32
RAPGEF6-201ENST00000296859 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF6-201ENST00000296859 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
RAPGEF6-201ENST00000296859 TTBK1Q5TCY1 1321 aaPredicted RBP6.75□□□□□ -1.33
RAPGEF6-201ENST00000296859 PELP1Q8IZL8 1130 aaKnown RBP6.69□□□□□ -1.34
RAPGEF6-201ENST00000296859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.62□□□□□ -1.35
RAPGEF6-201ENST00000296859 HNRNPUL2Q1KMD3 747 aaKnown RBP6.62□□□□□ -1.35
RAPGEF6-201ENST00000296859 SLC4A1APQ9BWU0 796 aaKnown RBP6.6□□□□□ -1.35
RAPGEF6-201ENST00000296859 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
RAPGEF6-201ENST00000296859 PLPPR3Q6T4P5 718 aa6.54□□□□□ -1.36
RAPGEF6-201ENST00000296859 ERICH6Q7L0X2 663 aa6.54□□□□□ -1.36
RAPGEF6-201ENST00000296859 GOLGB1Q14789 3259 aaKnown RBP6.53□□□□□ -1.36
RAPGEF6-201ENST00000296859 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
RAPGEF6-201ENST00000296859 SLC24A1O60721 1099 aa6.5□□□□□ -1.37
RAPGEF6-201ENST00000296859 BCANQ96GW7 911 aa6.48□□□□□ -1.37
RAPGEF6-201ENST00000296859 CNGB1Q14028 1251 aaPredicted RBP6.46□□□□□ -1.37
RAPGEF6-201ENST00000296859 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
RAPGEF6-201ENST00000296859 A0A0G2JS52 829 aa6.41□□□□□ -1.38
RAPGEF6-201ENST00000296859 UBTFP17480 764 aaKnown RBP6.37□□□□□ -1.39
RAPGEF6-201ENST00000296859 BCL11AQ9H165 835 aa6.36□□□□□ -1.39
RAPGEF6-201ENST00000296859 MYO15BQ96JP2 1530 aa6.35□□□□□ -1.39
RAPGEF6-201ENST00000296859 ESF1Q9H501 851 aaKnown RBP6.35□□□□□ -1.39
RAPGEF6-201ENST00000296859 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
RAPGEF6-201ENST00000296859 DAXXQ9UER7 740 aaPredicted RBP6.34□□□□□ -1.39
RAPGEF6-201ENST00000296859 FBLN2P98095 1184 aa6.34□□□□□ -1.4
RAPGEF6-201ENST00000296859 SCAF1Q9H7N4 1312 aaKnown RBP6.33□□□□□ -1.4
RAPGEF6-201ENST00000296859 MYT1Q01538 1121 aa6.32□□□□□ -1.4
RAPGEF6-201ENST00000296859 ITGAEP38570 1179 aa6.31□□□□□ -1.4
RAPGEF6-201ENST00000296859 UTRNP46939 3433 aa6.31□□□□□ -1.4
RAPGEF6-201ENST00000296859 NISCHQ9Y2I1 1504 aa6.3□□□□□ -1.4
RAPGEF6-201ENST00000296859 NEFLP07196 543 aa6.29□□□□□ -1.4
RAPGEF6-201ENST00000296859 PLEKHG5O94827 1062 aa6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 SENP3Q9H4L4 574 aaPredicted RBP6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 CLSPNQ9HAW4 1339 aa6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 ZBTB47Q9UFB7 747 aaPredicted RBP6.24□□□□□ -1.41
RAPGEF6-201ENST00000296859 STAG3Q9UJ98 1225 aa6.22□□□□□ -1.41
RAPGEF6-201ENST00000296859 TRIM41Q8WV44 630 aa6.19□□□□□ -1.42
RAPGEF6-201ENST00000296859 NCBP3Q53F19 620 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 HAP1P54257 671 aaPredicted RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 YTHDC1Q96MU7 727 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 PCNTO95613 3336 aa6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 PHF23Q9BUL5 403 aaPredicted RBP6.17□□□□□ -1.42
RAPGEF6-201ENST00000296859 NEFMP07197 916 aa6.16□□□□□ -1.42
RAPGEF6-201ENST00000296859 ZBTB7CA1YPR0 619 aa6.16□□□□□ -1.42
RAPGEF6-201ENST00000296859 C14orf37Q86TY3 774 aa6.15□□□□□ -1.42
RAPGEF6-201ENST00000296859 NPM1P06748 294 aaKnown RBP eCLIP6.15□□□□□ -1.42
RAPGEF6-201ENST00000296859 TULP1O00294 542 aaPredicted RBP6.14□□□□□ -1.43
RAPGEF6-201ENST00000296859 ZNF326Q5BKZ1 582 aaKnown RBP6.14□□□□□ -1.43
RAPGEF6-201ENST00000296859 PPARGC1BQ86YN6 1023 aaKnown RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 TRHP20396 242 aaPredicted RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 CHGAP10645 457 aaKnown RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
RAPGEF6-201ENST00000296859 TRIM52Q96A61 297 aa6.11□□□□□ -1.43
RAPGEF6-201ENST00000296859 ARID3CA6NKF2 412 aa6.11□□□□□ -1.43
RAPGEF6-201ENST00000296859 NPHP1O15259 732 aa6.1□□□□□ -1.43
RAPGEF6-201ENST00000296859 ARXQ96QS3 562 aa6.1□□□□□ -1.43
RAPGEF6-201ENST00000296859 CENPFP49454 3210 aa6.09□□□□□ -1.43
RAPGEF6-201ENST00000296859 CENPBP07199 599 aaPredicted RBP6.09□□□□□ -1.43
RAPGEF6-201ENST00000296859 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
RAPGEF6-201ENST00000296859 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF6-201ENST00000296859 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
RAPGEF6-201ENST00000296859 CANXP27824 592 aaKnown RBP6.07□□□□□ -1.44
RAPGEF6-201ENST00000296859 EP400Q96L91 3159 aa6.05□□□□□ -1.44
RAPGEF6-201ENST00000296859 KRI1Q8N9T8 703 aaKnown RBP6.05□□□□□ -1.44
RAPGEF6-201ENST00000296859 FAM50AQ14320 339 aaKnown RBP6.04□□□□□ -1.44
RAPGEF6-201ENST00000296859 ZNF777Q9ULD5 760 aaPredicted RBP6.02□□□□□ -1.44
RAPGEF6-201ENST00000296859 PABPN1Q86U42 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
RAPGEF6-201ENST00000296859 LMOD2Q6P5Q4 547 aa6.01□□□□□ -1.45
RAPGEF6-201ENST00000296859 DCAF8L1A6NGE4 600 aa6□□□□□ -1.45
RAPGEF6-201ENST00000296859 PPP1R15AO75807 674 aaPredicted RBP5.97□□□□□ -1.45
RAPGEF6-201ENST00000296859 CLSTN1O94985 981 aa5.95□□□□□ -1.46
RAPGEF6-201ENST00000296859 PRM3Q9NNZ6 103 aa5.94□□□□□ -1.46
RAPGEF6-201ENST00000296859 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.93□□□□□ -1.46
RAPGEF6-201ENST00000296859 NEUROD1Q13562 356 aa5.93□□□□□ -1.46
RAPGEF6-201ENST00000296859 CCDC9Q9Y3X0 531 aaKnown RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 ISY1Q9ULR0 285 aaKnown RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 WDFY3Q8IZQ1 3526 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 KLHL34Q8N239 644 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 TAOK2Q9UL54 1235 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 GOLGA2Q08379 1002 aa5.9□□□□□ -1.47
RAPGEF6-201ENST00000296859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.9□□□□□ -1.471e-6■■□□□ 13.7
RAPGEF6-201ENST00000296859 P3H3Q8IVL6 736 aa5.89□□□□□ -1.47
RAPGEF6-201ENST00000296859 VCANP13611 3396 aa5.89□□□□□ -1.47
RAPGEF6-201ENST00000296859 HSP90AA1P07900 732 aaKnown RBP5.87□□□□□ -1.47
RAPGEF6-201ENST00000296859 FKBP8Q14318 412 aa5.86□□□□□ -1.47
RAPGEF6-201ENST00000296859 ZEB1P37275 1124 aaPredicted RBP5.85□□□□□ -1.47
RAPGEF6-201ENST00000296859 TMX4Q9H1E5 349 aaPredicted RBP5.85□□□□□ -1.47
RAPGEF6-201ENST00000296859 MLECQ14165 292 aa5.83□□□□□ -1.48
RAPGEF6-201ENST00000296859 MSH5O43196 834 aa5.82□□□□□ -1.48
RAPGEF6-201ENST00000296859 KCNH8Q96L42 1107 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms