RNA–Protein interactions for RNA: ENST00000424337.6

GTF2IRD1-202, Transcript of GTF2I repeat domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-202ENST00000424337 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
GTF2IRD1-202ENST00000424337 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
GTF2IRD1-202ENST00000424337 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
GTF2IRD1-202ENST00000424337 HRCP23327 699 aa23.68■■□□□ 1.38
GTF2IRD1-202ENST00000424337 ABCC9O60706 1549 aa23.58■■□□□ 1.37
GTF2IRD1-202ENST00000424337 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
GTF2IRD1-202ENST00000424337 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
GTF2IRD1-202ENST00000424337 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
GTF2IRD1-202ENST00000424337 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
GTF2IRD1-202ENST00000424337 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
GTF2IRD1-202ENST00000424337 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
GTF2IRD1-202ENST00000424337 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
GTF2IRD1-202ENST00000424337 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
GTF2IRD1-202ENST00000424337 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
GTF2IRD1-202ENST00000424337 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
GTF2IRD1-202ENST00000424337 NACADO15069 1562 aa22.54■■□□□ 1.2
GTF2IRD1-202ENST00000424337 SCAF1Q9H7N4 1312 aaKnown RBP22.51■■□□□ 1.19
GTF2IRD1-202ENST00000424337 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
GTF2IRD1-202ENST00000424337 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
GTF2IRD1-202ENST00000424337 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
GTF2IRD1-202ENST00000424337 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
GTF2IRD1-202ENST00000424337 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
GTF2IRD1-202ENST00000424337 MYT1Q01538 1121 aa22.02■■□□□ 1.12
GTF2IRD1-202ENST00000424337 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
GTF2IRD1-202ENST00000424337 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
GTF2IRD1-202ENST00000424337 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
GTF2IRD1-202ENST00000424337 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
GTF2IRD1-202ENST00000424337 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
GTF2IRD1-202ENST00000424337 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
GTF2IRD1-202ENST00000424337 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
GTF2IRD1-202ENST00000424337 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
GTF2IRD1-202ENST00000424337 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
GTF2IRD1-202ENST00000424337 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
GTF2IRD1-202ENST00000424337 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
GTF2IRD1-202ENST00000424337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
GTF2IRD1-202ENST00000424337 DIEXFQ68CQ4 756 aaKnown RBP21.51■■□□□ 1.03
GTF2IRD1-202ENST00000424337 WIZO95785 1651 aa21.5■■□□□ 1.03
GTF2IRD1-202ENST00000424337 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
GTF2IRD1-202ENST00000424337 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
GTF2IRD1-202ENST00000424337 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
GTF2IRD1-202ENST00000424337 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
GTF2IRD1-202ENST00000424337 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
GTF2IRD1-202ENST00000424337 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
GTF2IRD1-202ENST00000424337 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
GTF2IRD1-202ENST00000424337 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
GTF2IRD1-202ENST00000424337 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
GTF2IRD1-202ENST00000424337 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
GTF2IRD1-202ENST00000424337 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
GTF2IRD1-202ENST00000424337 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
GTF2IRD1-202ENST00000424337 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
GTF2IRD1-202ENST00000424337 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
GTF2IRD1-202ENST00000424337 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
GTF2IRD1-202ENST00000424337 MIER1Q8N108 512 aa20.97■□□□□ 0.95
GTF2IRD1-202ENST00000424337 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
GTF2IRD1-202ENST00000424337 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
GTF2IRD1-202ENST00000424337 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
GTF2IRD1-202ENST00000424337 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
GTF2IRD1-202ENST00000424337 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
GTF2IRD1-202ENST00000424337 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
GTF2IRD1-202ENST00000424337 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
GTF2IRD1-202ENST00000424337 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
GTF2IRD1-202ENST00000424337 NESP48681 1621 aa20.61■□□□□ 0.89
GTF2IRD1-202ENST00000424337 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
GTF2IRD1-202ENST00000424337 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
GTF2IRD1-202ENST00000424337 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
GTF2IRD1-202ENST00000424337 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
GTF2IRD1-202ENST00000424337 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
GTF2IRD1-202ENST00000424337 CFTRP13569 1480 aa20.47■□□□□ 0.87
GTF2IRD1-202ENST00000424337 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
GTF2IRD1-202ENST00000424337 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
GTF2IRD1-202ENST00000424337 SOGA1O94964 1423 aa20.4■□□□□ 0.86
GTF2IRD1-202ENST00000424337 UBTFP17480 764 aaKnown RBP20.39■□□□□ 0.85
GTF2IRD1-202ENST00000424337 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
GTF2IRD1-202ENST00000424337 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
GTF2IRD1-202ENST00000424337 BCANQ96GW7 911 aa20.34■□□□□ 0.85
GTF2IRD1-202ENST00000424337 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
GTF2IRD1-202ENST00000424337 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
GTF2IRD1-202ENST00000424337 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
GTF2IRD1-202ENST00000424337 CUX1P39880 1505 aa20.23■□□□□ 0.83
GTF2IRD1-202ENST00000424337 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
GTF2IRD1-202ENST00000424337 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
GTF2IRD1-202ENST00000424337 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
GTF2IRD1-202ENST00000424337 FKBP8Q14318 412 aa20.16■□□□□ 0.82
GTF2IRD1-202ENST00000424337 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
GTF2IRD1-202ENST00000424337 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
GTF2IRD1-202ENST00000424337 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
GTF2IRD1-202ENST00000424337 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
GTF2IRD1-202ENST00000424337 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
GTF2IRD1-202ENST00000424337 CUX2O14529 1486 aa20.09■□□□□ 0.81
GTF2IRD1-202ENST00000424337 APLP2Q06481 763 aa20.08■□□□□ 0.8
GTF2IRD1-202ENST00000424337 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
GTF2IRD1-202ENST00000424337 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
GTF2IRD1-202ENST00000424337 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
GTF2IRD1-202ENST00000424337 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
GTF2IRD1-202ENST00000424337 ITGAEP38570 1179 aa20.02■□□□□ 0.8
GTF2IRD1-202ENST00000424337 KIF27Q86VH2 1401 aa20■□□□□ 0.79
GTF2IRD1-202ENST00000424337 GOLGA3Q08378 1498 aa20■□□□□ 0.79
GTF2IRD1-202ENST00000424337 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
GTF2IRD1-202ENST00000424337 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
GTF2IRD1-202ENST00000424337 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms