Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP002414.2-202ENST00000590929 1450 ntBASIC23.59■■□□□ 1.37
MT-ND1P03886 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND1P03886 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND1P03886 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
MT-ND1P03886 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.58■■□□□ 1.37
MT-ND1P03886 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-ND1P03886 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
MT-ND1P03886 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND1P03886 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.57■■□□□ 1.36
MT-ND1P03886 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND1P03886 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
MT-ND1P03886 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND1P03886 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
MT-ND1P03886 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND1P03886 AC020928.2-201ENST00000588717 2197 ntBASIC23.55■■□□□ 1.36
MT-ND1P03886 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.55■■□□□ 1.36
MT-ND1P03886 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.55■■□□□ 1.36
MT-ND1P03886 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
MT-ND1P03886 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND1P03886 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND1P03886 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.54■■□□□ 1.36
MT-ND1P03886 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
MT-ND1P03886 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
MT-ND1P03886 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
MT-ND1P03886 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND1P03886 MIR762-201ENST00000390236 83 ntBASIC23.53■■□□□ 1.36
MT-ND1P03886 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND1P03886 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND1P03886 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.53■■□□□ 1.36
MT-ND1P03886 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.53■■□□□ 1.36
MT-ND1P03886 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND1P03886 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND1P03886 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.52■■□□□ 1.36
MT-ND1P03886 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MT-ND1P03886 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND1P03886 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND1P03886 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MT-ND1P03886 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.51■■□□□ 1.35
MT-ND1P03886 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MT-ND1P03886 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.5■■□□□ 1.35
MT-ND1P03886 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
MT-ND1P03886 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND1P03886 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MT-ND1P03886 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.47■■□□□ 1.35
MT-ND1P03886 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND1P03886 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND1P03886 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND1P03886 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
MT-ND1P03886 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND1P03886 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MT-ND1P03886 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND1P03886 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND1P03886 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND1P03886 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND1P03886 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
MT-ND1P03886 AC145676.1-201ENST00000514988 2004 ntBASIC23.46■■□□□ 1.35
MT-ND1P03886 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
MT-ND1P03886 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.45■■□□□ 1.34
MT-ND1P03886 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND1P03886 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.45■■□□□ 1.34
MT-ND1P03886 SUZ12P1-203ENST00000578195 985 ntBASIC23.45■■□□□ 1.34
MT-ND1P03886 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND1P03886 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MT-ND1P03886 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.45■■□□□ 1.34
MT-ND1P03886 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
MT-ND1P03886 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MT-ND1P03886 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
MT-ND1P03886 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND1P03886 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND1P03886 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.43■■□□□ 1.34
MT-ND1P03886 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.43■■□□□ 1.34
MT-ND1P03886 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
MT-ND1P03886 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.42■■□□□ 1.34
MT-ND1P03886 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.42■■□□□ 1.34
MT-ND1P03886 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
MT-ND1P03886 AC018358.1-201ENST00000631079 1402 ntBASIC23.42■■□□□ 1.34
MT-ND1P03886 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
MT-ND1P03886 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.41■■□□□ 1.34
MT-ND1P03886 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
MT-ND1P03886 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND1P03886 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
MT-ND1P03886 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
MT-ND1P03886 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
MT-ND1P03886 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND1P03886 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND1P03886 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.4■■□□□ 1.34
MT-ND1P03886 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MT-ND1P03886 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
MT-ND1P03886 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.39■■□□□ 1.34
MT-ND1P03886 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
MT-ND1P03886 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.39■■□□□ 1.34
MT-ND1P03886 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MT-ND1P03886 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.39■■□□□ 1.33
MT-ND1P03886 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND1P03886 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms