Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DHFRP00374 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DHFRP00374 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHFRP00374 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DHFRP00374 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DHFRP00374 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DHFRP00374 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHFRP00374 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.6■■□□□ 1.05
DHFRP00374 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHFRP00374 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.6■■□□□ 1.05
DHFRP00374 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DHFRP00374 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHFRP00374 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.59■■□□□ 1.05
DHFRP00374 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DHFRP00374 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.58■■□□□ 1.05
DHFRP00374 AP004833.2-201ENST00000532228 1454 ntBASIC21.58■■□□□ 1.05
DHFRP00374 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DHFRP00374 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
DHFRP00374 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.58■■□□□ 1.05
DHFRP00374 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DHFRP00374 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DHFRP00374 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHFRP00374 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHFRP00374 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHFRP00374 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHFRP00374 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.56■■□□□ 1.04
DHFRP00374 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
DHFRP00374 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHFRP00374 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DHFRP00374 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DHFRP00374 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
DHFRP00374 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.55■■□□□ 1.04
DHFRP00374 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DHFRP00374 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
DHFRP00374 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.54■■□□□ 1.04
DHFRP00374 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.54■■□□□ 1.04
DHFRP00374 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.54■■□□□ 1.04
DHFRP00374 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
DHFRP00374 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DHFRP00374 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DHFRP00374 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DHFRP00374 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DHFRP00374 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DHFRP00374 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DHFRP00374 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.52■■□□□ 1.04
DHFRP00374 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DHFRP00374 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.52■■□□□ 1.03
DHFRP00374 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DHFRP00374 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.51■■□□□ 1.03
DHFRP00374 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.51■■□□□ 1.03
DHFRP00374 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DHFRP00374 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHFRP00374 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHFRP00374 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DHFRP00374 AC010864.1-201ENST00000609407 1511 ntBASIC21.5■■□□□ 1.03
DHFRP00374 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
DHFRP00374 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.49■■□□□ 1.03
DHFRP00374 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.49■■□□□ 1.03
DHFRP00374 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.49■■□□□ 1.03
DHFRP00374 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.49■■□□□ 1.03
DHFRP00374 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
DHFRP00374 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DHFRP00374 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DHFRP00374 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.48■■□□□ 1.03
DHFRP00374 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHFRP00374 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
DHFRP00374 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHFRP00374 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DHFRP00374 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DHFRP00374 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHFRP00374 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.46■■□□□ 1.03
DHFRP00374 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
DHFRP00374 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DHFRP00374 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
DHFRP00374 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHFRP00374 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.45■■□□□ 1.02
DHFRP00374 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHFRP00374 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
DHFRP00374 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHFRP00374 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHFRP00374 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DHFRP00374 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
DHFRP00374 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
DHFRP00374 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DHFRP00374 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.44■■□□□ 1.02
DHFRP00374 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DHFRP00374 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
DHFRP00374 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DHFRP00374 DUSP8P4-201ENST00000399538 1761 ntBASIC21.43■■□□□ 1.02
DHFRP00374 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms