Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSSCA1O60232 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SSSCA1O60232 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SSSCA1O60232 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSSCA1O60232 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.39■□□□□ 0.85
SSSCA1O60232 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSSCA1O60232 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SSSCA1O60232 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.38■□□□□ 0.85
SSSCA1O60232 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSSCA1O60232 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSSCA1O60232 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SSSCA1O60232 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSSCA1O60232 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSSCA1O60232 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SSSCA1O60232 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSSCA1O60232 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSSCA1O60232 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSSCA1O60232 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSSCA1O60232 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSSCA1O60232 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSSCA1O60232 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSSCA1O60232 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SSSCA1O60232 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.35■□□□□ 0.85
SSSCA1O60232 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSSCA1O60232 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SSSCA1O60232 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSSCA1O60232 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSSCA1O60232 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSSCA1O60232 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SSSCA1O60232 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SSSCA1O60232 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSSCA1O60232 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.34■□□□□ 0.85
SSSCA1O60232 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSSCA1O60232 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSSCA1O60232 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SSSCA1O60232 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.33■□□□□ 0.85
SSSCA1O60232 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.33■□□□□ 0.85
SSSCA1O60232 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSSCA1O60232 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSSCA1O60232 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSSCA1O60232 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSSCA1O60232 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SSSCA1O60232 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSSCA1O60232 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSSCA1O60232 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SSSCA1O60232 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.31■□□□□ 0.84
SSSCA1O60232 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.31■□□□□ 0.84
SSSCA1O60232 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSSCA1O60232 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.3■□□□□ 0.84
SSSCA1O60232 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
SSSCA1O60232 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.3■□□□□ 0.84
SSSCA1O60232 AC018358.1-201ENST00000631079 1402 ntBASIC20.3■□□□□ 0.84
SSSCA1O60232 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSSCA1O60232 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSSCA1O60232 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.29■□□□□ 0.84
SSSCA1O60232 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SSSCA1O60232 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSSCA1O60232 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSSCA1O60232 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.28■□□□□ 0.84
SSSCA1O60232 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSSCA1O60232 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSSCA1O60232 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSSCA1O60232 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSSCA1O60232 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.27■□□□□ 0.84
SSSCA1O60232 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSSCA1O60232 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SSSCA1O60232 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSSCA1O60232 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSSCA1O60232 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.27■□□□□ 0.83
SSSCA1O60232 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSSCA1O60232 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SSSCA1O60232 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSSCA1O60232 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSSCA1O60232 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SSSCA1O60232 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SSSCA1O60232 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.26■□□□□ 0.83
SSSCA1O60232 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSSCA1O60232 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.26■□□□□ 0.83
SSSCA1O60232 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.26■□□□□ 0.83
SSSCA1O60232 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSSCA1O60232 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
SSSCA1O60232 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.25■□□□□ 0.83
SSSCA1O60232 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSSCA1O60232 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSSCA1O60232 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSSCA1O60232 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSSCA1O60232 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SSSCA1O60232 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSSCA1O60232 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.24■□□□□ 0.83
SSSCA1O60232 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSSCA1O60232 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
SSSCA1O60232 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms