Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNFSF12O43508 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TNFSF12O43508 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFSF12O43508 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFSF12O43508 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12O43508 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF12O43508 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF12O43508 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.79■□□□□ 0.92
TNFSF12O43508 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12O43508 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF12O43508 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF12O43508 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFSF12O43508 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF12O43508 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFSF12O43508 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF12O43508 AL449106.1-201ENST00000608517 1980 ntBASIC20.74■□□□□ 0.91
TNFSF12O43508 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12O43508 AC005559.1-201ENST00000589661 871 ntBASIC20.73■□□□□ 0.91
TNFSF12O43508 AC135983.2-203ENST00000454486 1613 ntBASIC20.73■□□□□ 0.91
TNFSF12O43508 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12O43508 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFSF12O43508 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFSF12O43508 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF12O43508 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 WHAMMP2-203ENST00000563942 1603 ntBASIC20.71■□□□□ 0.91
TNFSF12O43508 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12O43508 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12O43508 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TNFSF12O43508 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12O43508 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12O43508 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
TNFSF12O43508 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.69■□□□□ 0.9
TNFSF12O43508 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 SUZ12P1-203ENST00000578195 985 ntBASIC20.69■□□□□ 0.9
TNFSF12O43508 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TNFSF12O43508 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TNFSF12O43508 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12O43508 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12O43508 AC018358.1-201ENST00000631079 1402 ntBASIC20.68■□□□□ 0.9
TNFSF12O43508 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF12O43508 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.67■□□□□ 0.9
TNFSF12O43508 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12O43508 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF12O43508 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF12O43508 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.66■□□□□ 0.9
TNFSF12O43508 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12O43508 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TNFSF12O43508 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 AC108673.1-201ENST00000510422 1159 ntBASIC20.65■□□□□ 0.9
TNFSF12O43508 MIR6090-201ENST00000622481 60 ntBASIC20.65■□□□□ 0.9
TNFSF12O43508 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF12O43508 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF12O43508 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TNFSF12O43508 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF12O43508 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms