Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SPTLC2O15270 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SPTLC2O15270 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.69■■■□□ 2.18
SPTLC2O15270 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SPTLC2O15270 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPTLC2O15270 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.67■■■□□ 2.18
SPTLC2O15270 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPTLC2O15270 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SPTLC2O15270 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPTLC2O15270 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.66■■■□□ 2.18
SPTLC2O15270 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.64■■■□□ 2.18
SPTLC2O15270 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SPTLC2O15270 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 AC021231.2-201ENST00000594613 730 ntBASIC28.62■■■□□ 2.17
SPTLC2O15270 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
SPTLC2O15270 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.6■■■□□ 2.17
SPTLC2O15270 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.6■■■□□ 2.17
SPTLC2O15270 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SPTLC2O15270 AC110285.7-201ENST00000624417 1536 ntBASIC28.59■■■□□ 2.17
SPTLC2O15270 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SPTLC2O15270 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SPTLC2O15270 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
SPTLC2O15270 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.56■■■□□ 2.16
SPTLC2O15270 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.56■■■□□ 2.16
SPTLC2O15270 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.56■■■□□ 2.16
SPTLC2O15270 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.55■■■□□ 2.16
SPTLC2O15270 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 DUX4L29-201ENST00000425409 679 ntBASIC28.55■■■□□ 2.16
SPTLC2O15270 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPTLC2O15270 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPTLC2O15270 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
SPTLC2O15270 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPTLC2O15270 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.52■■■□□ 2.16
SPTLC2O15270 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.52■■■□□ 2.16
SPTLC2O15270 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.51■■■□□ 2.16
SPTLC2O15270 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.51■■■□□ 2.16
SPTLC2O15270 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPTLC2O15270 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
SPTLC2O15270 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.5■■■□□ 2.15
SPTLC2O15270 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SPTLC2O15270 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPTLC2O15270 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.5■■■□□ 2.15
SPTLC2O15270 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPTLC2O15270 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SPTLC2O15270 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.49■■■□□ 2.15
SPTLC2O15270 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SPTLC2O15270 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.48■■■□□ 2.15
SPTLC2O15270 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPTLC2O15270 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
SPTLC2O15270 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SPTLC2O15270 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
SPTLC2O15270 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.46■■■□□ 2.15
SPTLC2O15270 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPTLC2O15270 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPTLC2O15270 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
SPTLC2O15270 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.46■■■□□ 2.15
SPTLC2O15270 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.45■■■□□ 2.14
SPTLC2O15270 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.44■■■□□ 2.14
SPTLC2O15270 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SPTLC2O15270 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms