Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 AC110285.7-201ENST00000624417 1536 ntBASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA2-SAA4A0A096LPE2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SAA2-SAA4A0A096LPE2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.52■□□□□ 0.87
SAA2-SAA4A0A096LPE2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA2-SAA4A0A096LPE2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.51■□□□□ 0.87
SAA2-SAA4A0A096LPE2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SAA2-SAA4A0A096LPE2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.51■□□□□ 0.87
SAA2-SAA4A0A096LPE2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SAA2-SAA4A0A096LPE2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA2-SAA4A0A096LPE2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.49■□□□□ 0.87
SAA2-SAA4A0A096LPE2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA2-SAA4A0A096LPE2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA2-SAA4A0A096LPE2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA2-SAA4A0A096LPE2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.48■□□□□ 0.87
SAA2-SAA4A0A096LPE2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SAA2-SAA4A0A096LPE2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SAA2-SAA4A0A096LPE2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SAA2-SAA4A0A096LPE2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.47■□□□□ 0.87
SAA2-SAA4A0A096LPE2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.47■□□□□ 0.87
SAA2-SAA4A0A096LPE2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA2-SAA4A0A096LPE2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
SAA2-SAA4A0A096LPE2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SAA2-SAA4A0A096LPE2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SAA2-SAA4A0A096LPE2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SAA2-SAA4A0A096LPE2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SAA2-SAA4A0A096LPE2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.45■□□□□ 0.86
SAA2-SAA4A0A096LPE2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SAA2-SAA4A0A096LPE2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SAA2-SAA4A0A096LPE2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SAA2-SAA4A0A096LPE2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.44■□□□□ 0.86
SAA2-SAA4A0A096LPE2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 LINC01971-201ENST00000617888 1048 ntBASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA2-SAA4A0A096LPE2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.42■□□□□ 0.86
SAA2-SAA4A0A096LPE2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SAA2-SAA4A0A096LPE2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.42■□□□□ 0.86
SAA2-SAA4A0A096LPE2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SAA2-SAA4A0A096LPE2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SAA2-SAA4A0A096LPE2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SAA2-SAA4A0A096LPE2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.41■□□□□ 0.86
SAA2-SAA4A0A096LPE2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.41■□□□□ 0.86
SAA2-SAA4A0A096LPE2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SAA2-SAA4A0A096LPE2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SAA2-SAA4A0A096LPE2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.39■□□□□ 0.86
SAA2-SAA4A0A096LPE2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SAA2-SAA4A0A096LPE2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SAA2-SAA4A0A096LPE2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SAA2-SAA4A0A096LPE2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.39■□□□□ 0.85
SAA2-SAA4A0A096LPE2 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.39■□□□□ 0.85
SAA2-SAA4A0A096LPE2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SAA2-SAA4A0A096LPE2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SAA2-SAA4A0A096LPE2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.38■□□□□ 0.85
SAA2-SAA4A0A096LPE2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.38■□□□□ 0.85
SAA2-SAA4A0A096LPE2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms