Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-2A0A087WT02 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-2A0A087WT02 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV9-2A0A087WT02 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-2A0A087WT02 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV9-2A0A087WT02 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-2A0A087WT02 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-2A0A087WT02 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-2A0A087WT02 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-2A0A087WT02 CAHM-201ENST00000604200 896 ntBASIC18.47■□□□□ 0.55
TRAV9-2A0A087WT02 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV9-2A0A087WT02 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV9-2A0A087WT02 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 SUZ12P1-203ENST00000578195 985 ntBASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 WASH5P-204ENST00000632292 975 ntBASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV9-2A0A087WT02 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV9-2A0A087WT02 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV9-2A0A087WT02 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV9-2A0A087WT02 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV9-2A0A087WT02 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV9-2A0A087WT02 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV9-2A0A087WT02 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-2A0A087WT02 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV9-2A0A087WT02 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-2A0A087WT02 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV9-2A0A087WT02 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV9-2A0A087WT02 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.39■□□□□ 0.54
TRAV9-2A0A087WT02 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 AC133561.1-201ENST00000568600 2415 ntBASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 AC145676.1-201ENST00000514988 2004 ntBASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 AP006261.1-201ENST00000584783 668 ntBASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV9-2A0A087WT02 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 LINC00543-201ENST00000567234 1845 ntBASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV9-2A0A087WT02 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV9-2A0A087WT02 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV9-2A0A087WT02 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.37■□□□□ 0.53
TRAV9-2A0A087WT02 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV9-2A0A087WT02 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV9-2A0A087WT02 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV9-2A0A087WT02 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV9-2A0A087WT02 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 AC012676.1-201ENST00000574705 1949 ntBASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV9-2A0A087WT02 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV9-2A0A087WT02 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRAV9-2A0A087WT02 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV9-2A0A087WT02 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV9-2A0A087WT02 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV9-2A0A087WT02 MIR3665-201ENST00000578708 105 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms