RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 FAP1P53971 965 aa1.84□□□□□ -2.11
snR87snR87 BUD31P25337 157 aaPredicted RBP1.8□□□□□ -2.12
snR87snR87 PRY3P47033 881 aa1.78□□□□□ -2.12
snR87snR87 RGA2Q06407 1009 aa1.65□□□□□ -2.15
snR87snR87 HAA1Q12753 694 aaKnown RBP1.63□□□□□ -2.15
snR87snR87 SIS1P25294 352 aaKnown RBP1.57□□□□□ -2.16
snR87snR87 YCK3P39962 524 aa1.57□□□□□ -2.16
snR87snR87 YGL015CP33199 130 aa1.24□□□□□ -2.21
snR87snR87 RGA1P39083 1007 aa1.24□□□□□ -2.21
snR87snR87 UBP9P39967 754 aa1.19□□□□□ -2.22
snR87snR87 AAD16Q02895 342 aa1.15□□□□□ -2.23
snR87snR87 PRI1P10363 409 aa0.95□□□□□ -2.26
snR87snR87 YJL171CP46992 396 aa0.93□□□□□ -2.26
snR87snR87 MRPL32P25348 183 aa0.81□□□□□ -2.28
snR87snR87 AIR2Q12476 344 aaKnown RBP0.8□□□□□ -2.28
snR87snR87 TSR3Q12094 313 aaKnown RBP0.78□□□□□ -2.28
snR87snR87 BMT6Q12291 365 aa0.75□□□□□ -2.29
snR87snR87 SPP1Q03012 353 aa0.74□□□□□ -2.29
snR87snR87 YPL062WQ02781 134 aa0.73□□□□□ -2.29
snR87snR87 TGL3P40308 642 aa0.71□□□□□ -2.3
snR87snR87 FKH1P40466 484 aa0.71□□□□□ -2.3
snR87snR87 TIF4632P39936 914 aaKnown RBP0.7□□□□□ -2.3
snR87snR87 NCR1Q12200 1170 aa0.7□□□□□ -2.3
snR87snR87 BCK2P33306 851 aa0.69□□□□□ -2.3
snR87snR87 UBP10P53874 792 aaPredicted RBP0.69□□□□□ -2.3
snR87snR87 YBL029C-AQ3E756 94 aa0.69□□□□□ -2.3
snR87snR87 VNX1P42839 908 aa0.63□□□□□ -2.31
snR87snR87 DPS1P04802 557 aaKnown RBP0.62□□□□□ -2.31
snR87snR87 MAP2P38174 421 aaKnown RBP0.61□□□□□ -2.31
snR87snR87 SRC1Q03707 834 aa0.6□□□□□ -2.31
snR87snR87 MTC5Q03897 1148 aa0.59□□□□□ -2.31
snR87snR87 SCY1P53009 804 aa0.57□□□□□ -2.32
snR87snR87 XDJ1P39102 459 aa0.56□□□□□ -2.32
snR87snR87 TIF11P38912 153 aaKnown RBP0.51□□□□□ -2.33
snR87snR87 LDB19Q12502 818 aa0.51□□□□□ -2.33
snR87snR87 MST1P07236 462 aa0.49□□□□□ -2.33
snR87snR87 AVT3P36062 692 aa0.48□□□□□ -2.33
snR87snR87 NRD1P53617 575 aaKnown RBP RIP-Chip data0.47□□□□□ -2.33not detected
snR87snR87 CHL1P22516 861 aaPredicted RBP0.46□□□□□ -2.34
snR87snR87 GBP2P25555 427 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
snR87snR87 SLX5P32828 619 aaKnown RBP0.45□□□□□ -2.34
snR87snR87 RPG1P38249 964 aaKnown RBP0.45□□□□□ -2.34
snR87snR87 ISW2Q08773 1120 aa0.45□□□□□ -2.34
snR87snR87 CDC27P38042 758 aa0.43□□□□□ -2.34
snR87snR87 VRP1P37370 817 aa0.42□□□□□ -2.34
snR87snR87 WSC3Q12215 556 aa0.42□□□□□ -2.34
snR87snR87 OXP1P28273 1286 aa0.41□□□□□ -2.34
snR87snR87 IOC2Q12072 812 aa0.41□□□□□ -2.34
snR87snR87 DAN4P47179 1161 aa0.4□□□□□ -2.35
snR87snR87 YOR238WQ08634 303 aa0.4□□□□□ -2.35
snR87snR87 ULI1P43604 169 aa0.38□□□□□ -2.35
snR87snR87 GAR1P28007 205 aaKnown RBP0.37□□□□□ -2.35
snR87snR87 PRE3P38624 215 aa0.37□□□□□ -2.35
snR87snR87 TRK1P12685 1235 aa0.36□□□□□ -2.35
snR87snR87 GIS1Q03833 894 aa0.36□□□□□ -2.35
snR87snR87 RTG1P32607 177 aa0.34□□□□□ -2.36
snR87snR87 SEC61P32915 480 aa0.31□□□□□ -2.36
snR87snR87 TFG1P41895 735 aaPredicted RBP0.3□□□□□ -2.36
snR87snR87 PEX29Q03370 554 aa0.3□□□□□ -2.36
snR87snR87 SAP30P38429 201 aa0.29□□□□□ -2.36
snR87snR87 LSB3P43603 459 aaKnown RBP0.27□□□□□ -2.37
snR87snR87 EAP1P36041 632 aaKnown RBP0.25□□□□□ -2.37
snR87snR87 YNL035CP53962 389 aaKnown RBP0.25□□□□□ -2.37
snR87snR87 RAS1P01119 309 aa0.22□□□□□ -2.37
snR87snR87 GTT3P39996 337 aa0.22□□□□□ -2.37
snR87snR87 NSR1P27476 414 aaKnown RBP RIP-Chip data0.21□□□□□ -2.38not detected
snR87snR87 GCR2Q01722 534 aa0.21□□□□□ -2.38
snR87snR87 YDL129WQ07555 291 aa0.2□□□□□ -2.38
snR87snR87 YAP5P40574 245 aa0.18□□□□□ -2.38
snR87snR87 BRE2P43132 505 aa0.18□□□□□ -2.38
snR87snR87 PUS1Q12211 544 aaKnown RBP0.18□□□□□ -2.38
snR87snR87 MSB4Q12317 492 aa0.18□□□□□ -2.38
snR87snR87 ICP55P40051 511 aa0.17□□□□□ -2.38
snR87snR87 YFR006WP43590 535 aa0.17□□□□□ -2.38
snR87snR87 TRP5P00931 707 aaKnown RBP0.16□□□□□ -2.38
snR87snR87 IRC24P40580 263 aa0.16□□□□□ -2.38
snR87snR87 TRK2P28584 889 aa0.15□□□□□ -2.39
snR87snR87 ENV9Q08651 330 aa0.15□□□□□ -2.39
snR87snR87 YDL176WQ12027 708 aa0.15□□□□□ -2.39
snR87snR87 MET22P32179 357 aa0.14□□□□□ -2.39
snR87snR87 SBP1P10080 294 aaKnown RBP0.13□□□□□ -2.39
snR87snR87 ELP4Q02884 456 aaKnown RBP0.13□□□□□ -2.39
snR87snR87 AMS1P22855 1083 aa0.1□□□□□ -2.39
snR87snR87 YPL034WQ03083 165 aa0.1□□□□□ -2.39
snR87snR87 SLX1P38324 304 aa0.09□□□□□ -2.4
snR87snR87 YDR444WQ04093 687 aa0.09□□□□□ -2.4
snR87snR87 DCD1P06773 312 aa0.08□□□□□ -2.4
snR87snR87 RIM101P33400 625 aa0.08□□□□□ -2.4
snR87snR87 MTC1P47018 478 aaKnown RBP0.08□□□□□ -2.4
snR87snR87 TFC8Q12308 588 aa0.08□□□□□ -2.4
snR87snR87 YPT53P36019 220 aa0.07□□□□□ -2.4
snR87snR87 YKR023WP36119 530 aaKnown RBP0.07□□□□□ -2.4
snR87snR87 PHM7Q12252 991 aa0.07□□□□□ -2.4
snR87snR87 HOP09932 586 aa0.06□□□□□ -2.4
snR87snR87 NFS1P25374 497 aa0.06□□□□□ -2.4
snR87snR87 JIP4Q03361 876 aa0.06□□□□□ -2.4
snR87snR87 SPT23P35210 1082 aa0.04□□□□□ -2.4
snR87snR87 CCT8P47079 568 aaKnown RBP0.04□□□□□ -2.4
snR87snR87 YDR344CQ05510 147 aa0.04□□□□□ -2.4
snR87snR87 YPR204WQ08995 1032 aa0.04□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms