RNA–Protein interactions for RNA: YOR115C

TRS33, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS33, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS33YOR115C MTC1P47018 478 aaKnown RBP13.88□□□□□ -0.19
TRS33YOR115C FAP1P53971 965 aa13.41□□□□□ -0.26
TRS33YOR115C PRY3P47033 881 aa12.64□□□□□ -0.39
TRS33YOR115C AAD16Q02895 342 aa12.19□□□□□ -0.46
TRS33YOR115C PRI1P10363 409 aa12.15□□□□□ -0.46
TRS33YOR115C DRS1P32892 752 aaKnown RBP12.15□□□□□ -0.46
TRS33YOR115C HAA1Q12753 694 aaKnown RBP11.9□□□□□ -0.5
TRS33YOR115C YCK3P39962 524 aa11.86□□□□□ -0.51
TRS33YOR115C ISW2Q08773 1120 aa11.69□□□□□ -0.54
TRS33YOR115C RPG1P38249 964 aaKnown RBP11.57□□□□□ -0.56
TRS33YOR115C TSR3Q12094 313 aaKnown RBP11.43□□□□□ -0.58
TRS33YOR115C MRPL32P25348 183 aa11.01□□□□□ -0.65
TRS33YOR115C DIP2Q12220 943 aaPredicted RBP10.94□□□□□ -0.66
TRS33YOR115C RSE1Q04693 1361 aaKnown RBP10.81□□□□□ -0.68
TRS33YOR115C YGL015CP33199 130 aa10.79□□□□□ -0.68
TRS33YOR115C REB1P21538 810 aa10.56□□□□□ -0.72
TRS33YOR115C RPL17AP05740 184 aaKnown RBP10.52□□□□□ -0.73
TRS33YOR115C RPL17BP46990 184 aaKnown RBP10.52□□□□□ -0.73
TRS33YOR115C BUD31P25337 157 aaPredicted RBP10.47□□□□□ -0.73
TRS33YOR115C AVT3P36062 692 aa10.31□□□□□ -0.76
TRS33YOR115C CDC27P38042 758 aa10.29□□□□□ -0.76
TRS33YOR115C UBP10P53874 792 aaPredicted RBP10.13□□□□□ -0.79
TRS33YOR115C YKR023WP36119 530 aaKnown RBP10.07□□□□□ -0.8
TRS33YOR115C MAP2P38174 421 aaKnown RBP10.07□□□□□ -0.8
TRS33YOR115C SPT21P35209 758 aa9.99□□□□□ -0.81
TRS33YOR115C HOP09932 586 aa9.87□□□□□ -0.83
TRS33YOR115C TFC8Q12308 588 aa9.87□□□□□ -0.83
TRS33YOR115C DCD1P06773 312 aa9.84□□□□□ -0.83
TRS33YOR115C SIS1P25294 352 aaKnown RBP9.82□□□□□ -0.84
TRS33YOR115C BFR2Q06631 534 aaKnown RBP9.79□□□□□ -0.84
TRS33YOR115C TIF4632P39936 914 aaKnown RBP9.73□□□□□ -0.85
TRS33YOR115C SCY1P53009 804 aa9.73□□□□□ -0.85
TRS33YOR115C UBP9P39967 754 aa9.69□□□□□ -0.86
TRS33YOR115C TGL3P40308 642 aa9.69□□□□□ -0.86
TRS33YOR115C SLX5P32828 619 aaKnown RBP9.66□□□□□ -0.86
TRS33YOR115C TFA1P36100 482 aa9.66□□□□□ -0.86
TRS33YOR115C BCH2P36122 765 aa9.51□□□□□ -0.89
TRS33YOR115C RIM101P33400 625 aa9.47□□□□□ -0.89
TRS33YOR115C EPS1P40557 701 aa9.22□□□□□ -0.93
TRS33YOR115C BDF1P35817 686 aa9.2□□□□□ -0.94
TRS33YOR115C MST1P07236 462 aa9.18□□□□□ -0.94
TRS33YOR115C YBL029C-AQ3E756 94 aa9.15□□□□□ -0.94
TRS33YOR115C OXP1P28273 1286 aa9.12□□□□□ -0.95
TRS33YOR115C YOR238WQ08634 303 aa9.12□□□□□ -0.95
TRS33YOR115C NSR1P27476 414 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
TRS33YOR115C PTP3P40048 928 aa9.03□□□□□ -0.96
TRS33YOR115C VNX1P42839 908 aa9.03□□□□□ -0.96
TRS33YOR115C YIL055CP40523 627 aaKnown RBP9.02□□□□□ -0.97
TRS33YOR115C YAP5P40574 245 aa8.95□□□□□ -0.98
TRS33YOR115C SPP1Q03012 353 aa8.95□□□□□ -0.98
TRS33YOR115C BBC1P47068 1157 aa8.94□□□□□ -0.98
TRS33YOR115C WSC3Q12215 556 aa8.91□□□□□ -0.98
TRS33YOR115C RSM7P47150 247 aa8.88□□□□□ -0.99
TRS33YOR115C AI2P03876 854 aa8.86□□□□□ -0.99
TRS33YOR115C AIR2Q12476 344 aaKnown RBP8.84□□□□□ -0.99
TRS33YOR115C TIF11P38912 153 aaKnown RBP8.82□□□□□ -1
TRS33YOR115C YJL171CP46992 396 aa8.82□□□□□ -1
TRS33YOR115C FKH1P40466 484 aa8.8□□□□□ -1
TRS33YOR115C GTT3P39996 337 aa8.79□□□□□ -1
TRS33YOR115C YAH1Q12184 172 aaKnown RBP8.75□□□□□ -1.01
TRS33YOR115C LDB19Q12502 818 aa8.68□□□□□ -1.02
TRS33YOR115C ULI1P43604 169 aa8.66□□□□□ -1.02
TRS33YOR115C BMT6Q12291 365 aa8.64□□□□□ -1.03
TRS33YOR115C IOC2Q12072 812 aa8.63□□□□□ -1.03
TRS33YOR115C PIB1Q06651 286 aa8.61□□□□□ -1.03
TRS33YOR115C RQC2Q12532 1038 aaKnown RBP8.58□□□□□ -1.04
TRS33YOR115C YLR271WQ06152 274 aa8.57□□□□□ -1.04
TRS33YOR115C MSB4Q12317 492 aa8.55□□□□□ -1.04
TRS33YOR115C PSD2P53037 1138 aaKnown RBP8.54□□□□□ -1.04
TRS33YOR115C EAP1P36041 632 aaKnown RBP8.52□□□□□ -1.05
TRS33YOR115C MRM1P25270 412 aa8.5□□□□□ -1.05
TRS33YOR115C RTG1P32607 177 aa8.46□□□□□ -1.06
TRS33YOR115C SET4P42948 560 aa8.44□□□□□ -1.06
TRS33YOR115C YOL036WQ08206 761 aa8.44□□□□□ -1.06
TRS33YOR115C TRP5P00931 707 aaKnown RBP8.43□□□□□ -1.06
TRS33YOR115C NCR1Q12200 1170 aa8.43□□□□□ -1.06
TRS33YOR115C SGS1P35187 1447 aa8.42□□□□□ -1.06
TRS33YOR115C SEC61P32915 480 aa8.37□□□□□ -1.07
TRS33YOR115C YMR1P47147 688 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
TRS33YOR115C YNL035CP53962 389 aaKnown RBP8.37□□□□□ -1.07
TRS33YOR115C DBP1P24784 617 aaKnown RBP8.35□□□□□ -1.07
TRS33YOR115C VPS29P38759 282 aa8.32□□□□□ -1.08
TRS33YOR115C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
TRS33YOR115C VMA1P17255 1071 aaKnown RBP8.3□□□□□ -1.08
TRS33YOR115C YFR006WP43590 535 aa8.3□□□□□ -1.08
TRS33YOR115C TFG1P41895 735 aaPredicted RBP8.28□□□□□ -1.08
TRS33YOR115C SAM3Q08986 587 aa8.28□□□□□ -1.08
TRS33YOR115C RTG3P38165 486 aa8.27□□□□□ -1.09
TRS33YOR115C SSP1P38871 571 aa8.26□□□□□ -1.09
TRS33YOR115C STS1P38637 319 aa8.25□□□□□ -1.09
TRS33YOR115C CST9Q06032 482 aa8.22□□□□□ -1.09
TRS33YOR115C SAP30P38429 201 aa8.21□□□□□ -1.1
TRS33YOR115C DAN4P47179 1161 aa8.2□□□□□ -1.1
TRS33YOR115C JIP4Q03361 876 aa8.2□□□□□ -1.1
TRS33YOR115C BCK2P33306 851 aa8.19□□□□□ -1.1
TRS33YOR115C ABP1P15891 592 aaKnown RBP8.17□□□□□ -1.1
TRS33YOR115C CHL1P22516 861 aaPredicted RBP8.16□□□□□ -1.1
TRS33YOR115C MGA2P40578 1113 aa8.16□□□□□ -1.1
TRS33YOR115C INO80P53115 1489 aa8.16□□□□□ -1.1
TRS33YOR115C YDL129WQ07555 291 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms