RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeastyeast

Gene CKB2, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKB2YOR039W MTC1P47018 478 aaKnown RBP14.9□□□□□ -0.02
CKB2YOR039W DRS1P32892 752 aaKnown RBP14.68□□□□□ -0.06
CKB2YOR039W BFR2Q06631 534 aaKnown RBP12.6□□□□□ -0.39
CKB2YOR039W DIP2Q12220 943 aaPredicted RBP12.59□□□□□ -0.39
CKB2YOR039W FAP1P53971 965 aa12.58□□□□□ -0.4
CKB2YOR039W AVT3P36062 692 aa12.36□□□□□ -0.43
CKB2YOR039W ISW2Q08773 1120 aa12.2□□□□□ -0.46
CKB2YOR039W PRI1P10363 409 aa12.1□□□□□ -0.47
CKB2YOR039W RPG1P38249 964 aaKnown RBP11.99□□□□□ -0.49
CKB2YOR039W RSE1Q04693 1361 aaKnown RBP11.97□□□□□ -0.49
CKB2YOR039W AAD16Q02895 342 aa11.93□□□□□ -0.5
CKB2YOR039W PRY3P47033 881 aa11.8□□□□□ -0.52
CKB2YOR039W TFA1P36100 482 aa11.71□□□□□ -0.53
CKB2YOR039W RPL17AP05740 184 aaKnown RBP11.5□□□□□ -0.57
CKB2YOR039W RPL17BP46990 184 aaKnown RBP11.5□□□□□ -0.57
CKB2YOR039W TSR3Q12094 313 aaKnown RBP11.43□□□□□ -0.58
CKB2YOR039W REB1P21538 810 aa11.41□□□□□ -0.58
CKB2YOR039W SPT21P35209 758 aa11.08□□□□□ -0.64
CKB2YOR039W HAA1Q12753 694 aaKnown RBP11.08□□□□□ -0.64
CKB2YOR039W MRPL32P25348 183 aa11.05□□□□□ -0.64
CKB2YOR039W YCK3P39962 524 aa11.04□□□□□ -0.64
CKB2YOR039W RIM101P33400 625 aa10.88□□□□□ -0.67
CKB2YOR039W YKR023WP36119 530 aaKnown RBP10.75□□□□□ -0.69
CKB2YOR039W CDC27P38042 758 aa10.57□□□□□ -0.72
CKB2YOR039W TFC8Q12308 588 aa10.56□□□□□ -0.72
CKB2YOR039W HOP09932 586 aa10.51□□□□□ -0.73
CKB2YOR039W OXP1P28273 1286 aa10.5□□□□□ -0.73
CKB2YOR039W DCD1P06773 312 aa10.41□□□□□ -0.74
CKB2YOR039W YIL055CP40523 627 aaKnown RBP10.4□□□□□ -0.74
CKB2YOR039W YGL015CP33199 130 aa10.39□□□□□ -0.75
CKB2YOR039W PTP3P40048 928 aa10.34□□□□□ -0.75
CKB2YOR039W SSP1P38871 571 aa10.29□□□□□ -0.76
CKB2YOR039W YAH1Q12184 172 aaKnown RBP10.29□□□□□ -0.76
CKB2YOR039W UBP10P53874 792 aaPredicted RBP10.28□□□□□ -0.76
CKB2YOR039W RSM7P47150 247 aa10.23□□□□□ -0.77
CKB2YOR039W BCH2P36122 765 aa10.22□□□□□ -0.77
CKB2YOR039W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
CKB2YOR039W YLR271WQ06152 274 aa10.18□□□□□ -0.78
CKB2YOR039W MAP2P38174 421 aaKnown RBP10.17□□□□□ -0.78
CKB2YOR039W SCY1P53009 804 aa10.12□□□□□ -0.79
CKB2YOR039W BBC1P47068 1157 aa10.07□□□□□ -0.8
CKB2YOR039W AI2P03876 854 aa10.06□□□□□ -0.8
CKB2YOR039W EPS1P40557 701 aa10.04□□□□□ -0.8
CKB2YOR039W SLX5P32828 619 aaKnown RBP9.98□□□□□ -0.81
CKB2YOR039W MGA2P40578 1113 aa9.98□□□□□ -0.81
CKB2YOR039W BDF1P35817 686 aa9.97□□□□□ -0.81
CKB2YOR039W PSD2P53037 1138 aaKnown RBP9.96□□□□□ -0.82
CKB2YOR039W INO80P53115 1489 aa9.89□□□□□ -0.83
CKB2YOR039W TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
CKB2YOR039W CST9Q06032 482 aa9.84□□□□□ -0.83
CKB2YOR039W MON2P48563 1636 aaPredicted RBP9.81□□□□□ -0.84
CKB2YOR039W TGL3P40308 642 aa9.76□□□□□ -0.85
CKB2YOR039W RQC2Q12532 1038 aaKnown RBP9.74□□□□□ -0.85
CKB2YOR039W MRM1P25270 412 aa9.73□□□□□ -0.85
CKB2YOR039W NSR1P27476 414 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
CKB2YOR039W RTG3P38165 486 aa9.62□□□□□ -0.87
CKB2YOR039W YAP5P40574 245 aa9.54□□□□□ -0.88
CKB2YOR039W RCR1P38212 213 aa9.52□□□□□ -0.89
CKB2YOR039W VPS29P38759 282 aa9.5□□□□□ -0.89
CKB2YOR039W DMA1P38823 416 aa9.49□□□□□ -0.89
CKB2YOR039W YMR1P47147 688 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
CKB2YOR039W TCB3Q03640 1545 aaKnown RBP9.49□□□□□ -0.89
CKB2YOR039W YOR238WQ08634 303 aa9.48□□□□□ -0.89
CKB2YOR039W RAM2P29703 316 aa9.47□□□□□ -0.89
CKB2YOR039W MST1P07236 462 aa9.45□□□□□ -0.9
CKB2YOR039W BUD31P25337 157 aaPredicted RBP9.44□□□□□ -0.9
CKB2YOR039W SGS1P35187 1447 aa9.41□□□□□ -0.9
CKB2YOR039W MAK11P20484 414 aaKnown RBP9.41□□□□□ -0.9
CKB2YOR039W DBP1P24784 617 aaKnown RBP9.39□□□□□ -0.91
CKB2YOR039W SWR1Q05471 1514 aa9.39□□□□□ -0.91
CKB2YOR039W STS1P38637 319 aa9.37□□□□□ -0.91
CKB2YOR039W DNA2P38859 1522 aa9.36□□□□□ -0.91
CKB2YOR039W YFR006WP43590 535 aa9.32□□□□□ -0.92
CKB2YOR039W TY1B-DR4Q07793 1604 aa9.31□□□□□ -0.92
CKB2YOR039W PIB1Q06651 286 aa9.31□□□□□ -0.92
CKB2YOR039W KOG1P38873 1557 aa9.29□□□□□ -0.92
CKB2YOR039W GTT3P39996 337 aa9.29□□□□□ -0.92
CKB2YOR039W UBP9P39967 754 aa9.26□□□□□ -0.93
CKB2YOR039W VMA1P17255 1071 aaKnown RBP9.25□□□□□ -0.93
CKB2YOR039W COQ8P27697 501 aa9.24□□□□□ -0.93
CKB2YOR039W NOP53Q12080 455 aaKnown RBP9.24□□□□□ -0.93
CKB2YOR039W SET1P38827 1080 aaKnown RBP9.23□□□□□ -0.93
CKB2YOR039W MIF2P35201 549 aa9.21□□□□□ -0.94
CKB2YOR039W SAM3Q08986 587 aa9.19□□□□□ -0.94
CKB2YOR039W EDS1P38073 919 aa9.17□□□□□ -0.94
CKB2YOR039W IFH1P39520 1085 aa9.17□□□□□ -0.94
CKB2YOR039W PTC3P34221 468 aaKnown RBP9.14□□□□□ -0.95
CKB2YOR039W SAS10Q12136 610 aaPredicted RBP9.14□□□□□ -0.95
CKB2YOR039W MSB4Q12317 492 aa9.14□□□□□ -0.95
CKB2YOR039W YBL029C-AQ3E756 94 aa9.12□□□□□ -0.95
CKB2YOR039W ABP1P15891 592 aaKnown RBP9.11□□□□□ -0.95
CKB2YOR039W YOL036WQ08206 761 aa9.11□□□□□ -0.95
CKB2YOR039W WSC3Q12215 556 aa9.11□□□□□ -0.95
CKB2YOR039W VNX1P42839 908 aa9.09□□□□□ -0.95
CKB2YOR039W YPR148CQ06523 435 aa9.09□□□□□ -0.95
CKB2YOR039W SPT6P23615 1451 aaKnown RBP9.08□□□□□ -0.96
CKB2YOR039W GRE2Q12068 342 aaKnown RBP9.08□□□□□ -0.96
CKB2YOR039W GYP5Q12344 894 aa9.08□□□□□ -0.96
CKB2YOR039W SPA2P23201 1466 aaKnown RBP9.08□□□□□ -0.96
CKB2YOR039W SET4P42948 560 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms