RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W BFR2Q06631 534 aaKnown RBP9.76□□□□□ -0.85
AVT4YNL101W NOP2P40991 618 aaKnown RBP9.44□□□□□ -0.9
AVT4YNL101W RQC2Q12532 1038 aaKnown RBP9.38□□□□□ -0.91
AVT4YNL101W SPA2P23201 1466 aaKnown RBP9.25□□□□□ -0.93
AVT4YNL101W NSR1P27476 414 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
AVT4YNL101W SSN2P38931 1420 aa9.12□□□□□ -0.95
AVT4YNL101W SGS1P35187 1447 aa9.09□□□□□ -0.95
AVT4YNL101W SKI3P17883 1432 aaKnown RBP9.05□□□□□ -0.96
AVT4YNL101W EBP2P36049 427 aaKnown RBP8.99□□□□□ -0.97
AVT4YNL101W CAB3P36076 571 aa8.96□□□□□ -0.97
AVT4YNL101W DRS1P32892 752 aaKnown RBP8.86□□□□□ -0.99
AVT4YNL101W YPR148CQ06523 435 aa8.81□□□□□ -1
AVT4YNL101W SIS2P36024 562 aa8.68□□□□□ -1.02
AVT4YNL101W RSE1Q04693 1361 aaKnown RBP8.66□□□□□ -1.02
AVT4YNL101W URN1Q06525 465 aaKnown RBP8.64□□□□□ -1.03
AVT4YNL101W ENP1P38333 483 aaKnown RBP8.6□□□□□ -1.03
AVT4YNL101W MMS22Q06164 1454 aa8.58□□□□□ -1.04
AVT4YNL101W TCB3Q03640 1545 aaKnown RBP8.57□□□□□ -1.04
AVT4YNL101W INO80P53115 1489 aa8.52□□□□□ -1.05
AVT4YNL101W AVT3P36062 692 aa8.5□□□□□ -1.05
AVT4YNL101W UFD4P33202 1483 aa8.49□□□□□ -1.05
AVT4YNL101W CHD1P32657 1468 aa8.49□□□□□ -1.05
AVT4YNL101W TAF7Q05021 590 aa8.44□□□□□ -1.06
AVT4YNL101W SPT7P35177 1332 aa8.44□□□□□ -1.06
AVT4YNL101W STH1P32597 1359 aa8.43□□□□□ -1.06
AVT4YNL101W XRN1P22147 1528 aaKnown RBP8.42□□□□□ -1.06
AVT4YNL101W MON2P48563 1636 aaPredicted RBP8.37□□□□□ -1.07
AVT4YNL101W POL5P39985 1022 aaKnown RBP8.37□□□□□ -1.07
AVT4YNL101W TRM732Q03496 1420 aa8.37□□□□□ -1.07
AVT4YNL101W PRS1P32895 427 aaKnown RBP8.36□□□□□ -1.07
AVT4YNL101W TCB2P48231 1178 aa8.35□□□□□ -1.07
AVT4YNL101W SPP41P38904 1435 aa8.34□□□□□ -1.07
AVT4YNL101W CLC1P17891 233 aa8.32□□□□□ -1.08
AVT4YNL101W IME2P32581 645 aa8.31□□□□□ -1.08
AVT4YNL101W YFR016CP43597 1233 aaKnown RBP8.31□□□□□ -1.08
AVT4YNL101W LEO1P38439 464 aa8.3□□□□□ -1.08
AVT4YNL101W IKI3Q06706 1349 aaKnown RBP8.29□□□□□ -1.08
AVT4YNL101W SEC3P33332 1336 aaKnown RBP8.28□□□□□ -1.08
AVT4YNL101W SAS10Q12136 610 aaPredicted RBP8.27□□□□□ -1.08
AVT4YNL101W ECM5Q03214 1411 aa8.26□□□□□ -1.09
AVT4YNL101W CFT1Q06632 1357 aaKnown RBP8.25□□□□□ -1.09
AVT4YNL101W MNN4P36044 1178 aa8.25□□□□□ -1.09
AVT4YNL101W TFA1P36100 482 aa8.24□□□□□ -1.09
AVT4YNL101W SSM4P40318 1319 aa8.23□□□□□ -1.09
AVT4YNL101W LEU3P08638 886 aa8.23□□□□□ -1.09
AVT4YNL101W AIM44Q99299 758 aa8.2□□□□□ -1.1
AVT4YNL101W OPY1P38271 328 aa8.2□□□□□ -1.1
AVT4YNL101W CWC22P53333 577 aaKnown RBP8.2□□□□□ -1.1
AVT4YNL101W MYO2P19524 1574 aaKnown RBP8.19□□□□□ -1.1
AVT4YNL101W RTT106P40161 455 aa8.18□□□□□ -1.1
AVT4YNL101W PDR10P51533 1564 aa8.16□□□□□ -1.1
AVT4YNL101W RPC31P17890 251 aa8.13□□□□□ -1.11
AVT4YNL101W RPS0BP46654 252 aaKnown RBP8.12□□□□□ -1.11
AVT4YNL101W EAF7P53911 425 aaKnown RBP8.12□□□□□ -1.11
AVT4YNL101W BUD4P47136 1447 aa8.12□□□□□ -1.11
AVT4YNL101W FUN12P39730 1002 aaKnown RBP8.11□□□□□ -1.11
AVT4YNL101W PEP1P32319 1579 aa8.09□□□□□ -1.11
AVT4YNL101W STU1P38198 1513 aa8.09□□□□□ -1.11
AVT4YNL101W SRB8P25648 1427 aa8.09□□□□□ -1.11
AVT4YNL101W NUP170P38181 1502 aa8.08□□□□□ -1.12
AVT4YNL101W SPT21P35209 758 aa8.08□□□□□ -1.12
AVT4YNL101W FPR3P38911 411 aaKnown RBP8.08□□□□□ -1.12
AVT4YNL101W PSD2P53037 1138 aaKnown RBP8.07□□□□□ -1.12
AVT4YNL101W HSL1P34244 1518 aa8.07□□□□□ -1.12
AVT4YNL101W YGR130CP53278 816 aa8.06□□□□□ -1.12
AVT4YNL101W BPT1P14772 1559 aa8.06□□□□□ -1.12
AVT4YNL101W SCC2Q04002 1493 aa8.06□□□□□ -1.12
AVT4YNL101W SNF7P39929 240 aaKnown RBP8.04□□□□□ -1.12
AVT4YNL101W SPT6P23615 1451 aaKnown RBP8.04□□□□□ -1.12
AVT4YNL101W QCR6P00127 147 aa8.03□□□□□ -1.12
AVT4YNL101W TOP2P06786 1428 aaKnown RBP8.02□□□□□ -1.13
AVT4YNL101W YLR419WQ06698 1435 aaKnown RBP8.02□□□□□ -1.13
AVT4YNL101W TAF2P23255 1407 aa8.02□□□□□ -1.13
AVT4YNL101W ENV11P53246 860 aa8.01□□□□□ -1.13
AVT4YNL101W YTA7P40340 1379 aa8.01□□□□□ -1.13
AVT4YNL101W MLP2P40457 1679 aa8□□□□□ -1.13
AVT4YNL101W REV3P14284 1504 aa8□□□□□ -1.13
AVT4YNL101W THO2P53552 1597 aaKnown RBP7.99□□□□□ -1.13
AVT4YNL101W HIR3P47171 1648 aa7.98□□□□□ -1.13
AVT4YNL101W TY1B-DR4Q07793 1604 aa7.98□□□□□ -1.13
AVT4YNL101W ROX1P25042 368 aa7.97□□□□□ -1.13
AVT4YNL101W PAN1P32521 1480 aa7.96□□□□□ -1.13
AVT4YNL101W PAF1P38351 445 aa7.96□□□□□ -1.14
AVT4YNL101W SSK2P53599 1579 aa7.96□□□□□ -1.14
AVT4YNL101W NOP53Q12080 455 aaKnown RBP7.96□□□□□ -1.14
AVT4YNL101W POL1P13382 1468 aa7.95□□□□□ -1.14
AVT4YNL101W NUG1P40010 520 aaKnown RBP7.94□□□□□ -1.14
AVT4YNL101W RLF2Q12495 606 aa7.94□□□□□ -1.14
AVT4YNL101W SLN1P39928 1220 aaPredicted RBP7.94□□□□□ -1.14
AVT4YNL101W DJP1P40564 432 aa7.94□□□□□ -1.14
AVT4YNL101W MTC1P47018 478 aaKnown RBP7.94□□□□□ -1.14
AVT4YNL101W MMS1Q06211 1407 aa7.93□□□□□ -1.14
AVT4YNL101W NAP1P25293 417 aaKnown RBP7.93□□□□□ -1.14
AVT4YNL101W KRI1P42846 591 aaKnown RBP7.93□□□□□ -1.14
AVT4YNL101W CTR9P89105 1077 aa7.93□□□□□ -1.14
AVT4YNL101W DIP2Q12220 943 aaPredicted RBP7.93□□□□□ -1.14
AVT4YNL101W SIN3P22579 1536 aa7.91□□□□□ -1.14
AVT4YNL101W RNA1P11745 407 aaKnown RBP7.9□□□□□ -1.14
AVT4YNL101W FPR4Q06205 392 aaPredicted RBP7.9□□□□□ -1.15
AVT4YNL101W SMC4Q12267 1418 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms