RNA–Protein interactions for RNA: YMR110C

HFD1, Transcript of Hexadecenal dehydrogenase, yeastyeast

Gene HFD1, Length 1,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFD1YMR110C MTC1P47018 478 aaKnown RBP13.71□□□□□ -0.21
HFD1YMR110C FAP1P53971 965 aa13.18□□□□□ -0.3
HFD1YMR110C PRY3P47033 881 aa12.4□□□□□ -0.42
HFD1YMR110C DRS1P32892 752 aaKnown RBP12.11□□□□□ -0.47
HFD1YMR110C AAD16Q02895 342 aa12□□□□□ -0.49
HFD1YMR110C PRI1P10363 409 aa11.96□□□□□ -0.49
HFD1YMR110C HAA1Q12753 694 aaKnown RBP11.61□□□□□ -0.55
HFD1YMR110C YCK3P39962 524 aa11.6□□□□□ -0.55
HFD1YMR110C ISW2Q08773 1120 aa11.56□□□□□ -0.56
HFD1YMR110C RPG1P38249 964 aaKnown RBP11.44□□□□□ -0.58
HFD1YMR110C TSR3Q12094 313 aaKnown RBP11.27□□□□□ -0.61
HFD1YMR110C DIP2Q12220 943 aaPredicted RBP10.88□□□□□ -0.67
HFD1YMR110C MRPL32P25348 183 aa10.86□□□□□ -0.67
HFD1YMR110C RSE1Q04693 1361 aaKnown RBP10.73□□□□□ -0.69
HFD1YMR110C YGL015CP33199 130 aa10.62□□□□□ -0.71
HFD1YMR110C REB1P21538 810 aa10.47□□□□□ -0.73
HFD1YMR110C RPL17AP05740 184 aaKnown RBP10.42□□□□□ -0.74
HFD1YMR110C RPL17BP46990 184 aaKnown RBP10.42□□□□□ -0.74
HFD1YMR110C AVT3P36062 692 aa10.26□□□□□ -0.77
HFD1YMR110C CDC27P38042 758 aa10.14□□□□□ -0.79
HFD1YMR110C BUD31P25337 157 aaPredicted RBP10.02□□□□□ -0.81
HFD1YMR110C UBP10P53874 792 aaPredicted RBP9.99□□□□□ -0.81
HFD1YMR110C YKR023WP36119 530 aaKnown RBP9.95□□□□□ -0.82
HFD1YMR110C MAP2P38174 421 aaKnown RBP9.92□□□□□ -0.82
HFD1YMR110C SPT21P35209 758 aa9.88□□□□□ -0.83
HFD1YMR110C HOP09932 586 aa9.75□□□□□ -0.85
HFD1YMR110C TFC8Q12308 588 aa9.75□□□□□ -0.85
HFD1YMR110C BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
HFD1YMR110C DCD1P06773 312 aa9.71□□□□□ -0.85
HFD1YMR110C TIF4632P39936 914 aaKnown RBP9.61□□□□□ -0.87
HFD1YMR110C SCY1P53009 804 aa9.61□□□□□ -0.87
HFD1YMR110C TGL3P40308 642 aa9.56□□□□□ -0.88
HFD1YMR110C SLX5P32828 619 aaKnown RBP9.54□□□□□ -0.88
HFD1YMR110C SIS1P25294 352 aaKnown RBP9.51□□□□□ -0.89
HFD1YMR110C UBP9P39967 754 aa9.51□□□□□ -0.89
HFD1YMR110C BCH2P36122 765 aa9.41□□□□□ -0.9
HFD1YMR110C RIM101P33400 625 aa9.4□□□□□ -0.9
HFD1YMR110C EPS1P40557 701 aa9.13□□□□□ -0.95
HFD1YMR110C BDF1P35817 686 aa9.11□□□□□ -0.95
HFD1YMR110C MST1P07236 462 aa9.05□□□□□ -0.96
HFD1YMR110C OXP1P28273 1286 aa9.05□□□□□ -0.96
HFD1YMR110C YOR238WQ08634 303 aa9.02□□□□□ -0.97
HFD1YMR110C YBL029C-AQ3E756 94 aa9.02□□□□□ -0.97
HFD1YMR110C PTP3P40048 928 aa8.99□□□□□ -0.97
HFD1YMR110C YIL055CP40523 627 aaKnown RBP8.98□□□□□ -0.97
HFD1YMR110C NSR1P27476 414 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
HFD1YMR110C VNX1P42839 908 aa8.9□□□□□ -0.99
HFD1YMR110C BBC1P47068 1157 aa8.88□□□□□ -0.99
HFD1YMR110C YAP5P40574 245 aa8.86□□□□□ -0.99
HFD1YMR110C SPP1Q03012 353 aa8.84□□□□□ -0.99
HFD1YMR110C RSM7P47150 247 aa8.82□□□□□ -1
HFD1YMR110C AI2P03876 854 aa8.8□□□□□ -1
HFD1YMR110C WSC3Q12215 556 aa8.8□□□□□ -1
HFD1YMR110C YAH1Q12184 172 aaKnown RBP8.71□□□□□ -1.02
HFD1YMR110C TIF11P38912 153 aaKnown RBP8.7□□□□□ -1.02
HFD1YMR110C GTT3P39996 337 aa8.7□□□□□ -1.02
HFD1YMR110C YJL171CP46992 396 aa8.7□□□□□ -1.02
HFD1YMR110C AIR2Q12476 344 aaKnown RBP8.69□□□□□ -1.02
HFD1YMR110C FKH1P40466 484 aa8.66□□□□□ -1.02
HFD1YMR110C LDB19Q12502 818 aa8.56□□□□□ -1.04
HFD1YMR110C ULI1P43604 169 aa8.56□□□□□ -1.04
HFD1YMR110C YLR271WQ06152 274 aa8.52□□□□□ -1.04
HFD1YMR110C PIB1Q06651 286 aa8.52□□□□□ -1.04
HFD1YMR110C IOC2Q12072 812 aa8.52□□□□□ -1.05
HFD1YMR110C BMT6Q12291 365 aa8.52□□□□□ -1.05
HFD1YMR110C PSD2P53037 1138 aaKnown RBP8.48□□□□□ -1.05
HFD1YMR110C MSB4Q12317 492 aa8.45□□□□□ -1.06
HFD1YMR110C MRM1P25270 412 aa8.44□□□□□ -1.06
HFD1YMR110C EAP1P36041 632 aaKnown RBP8.44□□□□□ -1.06
HFD1YMR110C TFA1P36100 482 aa8.41□□□□□ -1.06
HFD1YMR110C RTG1P32607 177 aa8.37□□□□□ -1.07
HFD1YMR110C SET4P42948 560 aa8.35□□□□□ -1.07
HFD1YMR110C YOL036WQ08206 761 aa8.35□□□□□ -1.07
HFD1YMR110C NCR1Q12200 1170 aa8.34□□□□□ -1.07
HFD1YMR110C TRP5P00931 707 aaKnown RBP8.33□□□□□ -1.08
HFD1YMR110C YMR1P47147 688 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
HFD1YMR110C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
HFD1YMR110C YNL035CP53962 389 aaKnown RBP8.29□□□□□ -1.08
HFD1YMR110C DBP1P24784 617 aaKnown RBP8.28□□□□□ -1.08
HFD1YMR110C SEC61P32915 480 aa8.27□□□□□ -1.09
HFD1YMR110C VPS29P38759 282 aa8.25□□□□□ -1.09
HFD1YMR110C SSP1P38871 571 aa8.25□□□□□ -1.09
HFD1YMR110C VMA1P17255 1071 aaKnown RBP8.23□□□□□ -1.09
HFD1YMR110C YFR006WP43590 535 aa8.23□□□□□ -1.09
HFD1YMR110C RTG3P38165 486 aa8.22□□□□□ -1.09
HFD1YMR110C TFG1P41895 735 aaPredicted RBP8.21□□□□□ -1.1
HFD1YMR110C SAM3Q08986 587 aa8.2□□□□□ -1.1
HFD1YMR110C STS1P38637 319 aa8.18□□□□□ -1.1
HFD1YMR110C CST9Q06032 482 aa8.17□□□□□ -1.1
HFD1YMR110C MGA2P40578 1113 aa8.14□□□□□ -1.11
HFD1YMR110C SAP30P38429 201 aa8.13□□□□□ -1.11
HFD1YMR110C JIP4Q03361 876 aa8.12□□□□□ -1.11
HFD1YMR110C ABP1P15891 592 aaKnown RBP8.1□□□□□ -1.11
HFD1YMR110C DAN4P47179 1161 aa8.1□□□□□ -1.11
HFD1YMR110C BCK2P33306 851 aa8.08□□□□□ -1.12
HFD1YMR110C GYP5Q12344 894 aa8.08□□□□□ -1.12
HFD1YMR110C YDL129WQ07555 291 aa8.07□□□□□ -1.12
HFD1YMR110C CHL1P22516 861 aaPredicted RBP8.06□□□□□ -1.12
HFD1YMR110C HTA1P04911 132 aaKnown RBP8.05□□□□□ -1.12
HFD1YMR110C HTA2P04912 132 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms