RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C MTC1P47018 478 aaKnown RBP13.09□□□□□ -0.31
VPS71YML041C DRS1P32892 752 aaKnown RBP12.59□□□□□ -0.39
VPS71YML041C FAP1P53971 965 aa11.67□□□□□ -0.54
VPS71YML041C PRY3P47033 881 aa11.07□□□□□ -0.64
VPS71YML041C BFR2Q06631 534 aaKnown RBP11.07□□□□□ -0.64
VPS71YML041C PRI1P10363 409 aa10.94□□□□□ -0.66
VPS71YML041C TFA1P36100 482 aa10.86□□□□□ -0.67
VPS71YML041C DIP2Q12220 943 aaPredicted RBP10.84□□□□□ -0.67
VPS71YML041C AAD16Q02895 342 aa10.83□□□□□ -0.68
VPS71YML041C ISW2Q08773 1120 aa10.78□□□□□ -0.68
VPS71YML041C AVT3P36062 692 aa10.69□□□□□ -0.7
VPS71YML041C RPG1P38249 964 aaKnown RBP10.69□□□□□ -0.7
VPS71YML041C YCK3P39962 524 aa10.4□□□□□ -0.74
VPS71YML041C RSE1Q04693 1361 aaKnown RBP10.39□□□□□ -0.75
VPS71YML041C TSR3Q12094 313 aaKnown RBP10.35□□□□□ -0.75
VPS71YML041C HAA1Q12753 694 aaKnown RBP10.24□□□□□ -0.77
VPS71YML041C RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
VPS71YML041C RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
VPS71YML041C REB1P21538 810 aa9.97□□□□□ -0.81
VPS71YML041C MRPL32P25348 183 aa9.92□□□□□ -0.82
VPS71YML041C SPT21P35209 758 aa9.66□□□□□ -0.86
VPS71YML041C YKR023WP36119 530 aaKnown RBP9.51□□□□□ -0.89
VPS71YML041C CDC27P38042 758 aa9.49□□□□□ -0.89
VPS71YML041C RQC2Q12532 1038 aaKnown RBP9.49□□□□□ -0.89
VPS71YML041C YGL015CP33199 130 aa9.46□□□□□ -0.9
VPS71YML041C RIM101P33400 625 aa9.38□□□□□ -0.91
VPS71YML041C BUD31P25337 157 aaPredicted RBP9.32□□□□□ -0.92
VPS71YML041C HOP09932 586 aa9.31□□□□□ -0.92
VPS71YML041C TFC8Q12308 588 aa9.31□□□□□ -0.92
VPS71YML041C DCD1P06773 312 aa9.27□□□□□ -0.93
VPS71YML041C UBP10P53874 792 aaPredicted RBP9.17□□□□□ -0.94
VPS71YML041C MAP2P38174 421 aaKnown RBP9.16□□□□□ -0.94
VPS71YML041C OXP1P28273 1286 aa9.09□□□□□ -0.95
VPS71YML041C DMA1P38823 416 aa9.05□□□□□ -0.96
VPS71YML041C PTP3P40048 928 aa9.04□□□□□ -0.96
VPS71YML041C BCH2P36122 765 aa9.02□□□□□ -0.97
VPS71YML041C SCY1P53009 804 aa9□□□□□ -0.97
VPS71YML041C SSP1P38871 571 aa8.97□□□□□ -0.97
VPS71YML041C YIL055CP40523 627 aaKnown RBP8.92□□□□□ -0.98
VPS71YML041C SLX5P32828 619 aaKnown RBP8.87□□□□□ -0.99
VPS71YML041C YAH1Q12184 172 aaKnown RBP8.84□□□□□ -0.99
VPS71YML041C EPS1P40557 701 aa8.8□□□□□ -1
VPS71YML041C RSM7P47150 247 aa8.8□□□□□ -1
VPS71YML041C YLR271WQ06152 274 aa8.78□□□□□ -1
VPS71YML041C TIF4632P39936 914 aaKnown RBP8.77□□□□□ -1.01
VPS71YML041C BDF1P35817 686 aa8.76□□□□□ -1.01
VPS71YML041C TGL3P40308 642 aa8.75□□□□□ -1.01
VPS71YML041C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
VPS71YML041C AI2P03876 854 aa8.69□□□□□ -1.02
VPS71YML041C BBC1P47068 1157 aa8.66□□□□□ -1.02
VPS71YML041C SIS1P25294 352 aaKnown RBP8.65□□□□□ -1.02
VPS71YML041C MGA2P40578 1113 aa8.6□□□□□ -1.03
VPS71YML041C PSD2P53037 1138 aaKnown RBP8.56□□□□□ -1.04
VPS71YML041C SAS10Q12136 610 aaPredicted RBP8.56□□□□□ -1.04
VPS71YML041C LEO1P38439 464 aa8.53□□□□□ -1.04
VPS71YML041C TAF7Q05021 590 aa8.51□□□□□ -1.05
VPS71YML041C CST9Q06032 482 aa8.51□□□□□ -1.05
VPS71YML041C MST1P07236 462 aa8.43□□□□□ -1.06
VPS71YML041C NSR1P27476 414 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
VPS71YML041C MRM1P25270 412 aa8.4□□□□□ -1.06
VPS71YML041C UBP9P39967 754 aa8.4□□□□□ -1.06
VPS71YML041C YOR238WQ08634 303 aa8.4□□□□□ -1.06
VPS71YML041C LEU3P08638 886 aa8.38□□□□□ -1.07
VPS71YML041C YAP5P40574 245 aa8.36□□□□□ -1.07
VPS71YML041C RAM2P29703 316 aa8.31□□□□□ -1.08
VPS71YML041C YBL029C-AQ3E756 94 aa8.24□□□□□ -1.09
VPS71YML041C RTG3P38165 486 aa8.23□□□□□ -1.09
VPS71YML041C VPS29P38759 282 aa8.22□□□□□ -1.09
VPS71YML041C RCR1P38212 213 aa8.21□□□□□ -1.1
VPS71YML041C PIB1Q06651 286 aa8.21□□□□□ -1.1
VPS71YML041C YPR148CQ06523 435 aa8.19□□□□□ -1.1
VPS71YML041C VNX1P42839 908 aa8.18□□□□□ -1.1
VPS71YML041C SET1P38827 1080 aaKnown RBP8.17□□□□□ -1.1
VPS71YML041C YMR1P47147 688 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
VPS71YML041C GTT3P39996 337 aa8.15□□□□□ -1.1
VPS71YML041C WSC3Q12215 556 aa8.15□□□□□ -1.1
VPS71YML041C DBP1P24784 617 aaKnown RBP8.14□□□□□ -1.11
VPS71YML041C STS1P38637 319 aa8.13□□□□□ -1.11
VPS71YML041C YFR006WP43590 535 aa8.13□□□□□ -1.11
VPS71YML041C RPN1P38764 993 aaKnown RBP8.1□□□□□ -1.11
VPS71YML041C MAK11P20484 414 aaKnown RBP8.09□□□□□ -1.11
VPS71YML041C CKB1P43639 278 aa8.09□□□□□ -1.11
VPS71YML041C SPP1Q03012 353 aa8.08□□□□□ -1.12
VPS71YML041C IFH1P39520 1085 aa8.06□□□□□ -1.12
VPS71YML041C VPS70P47161 811 aa8.05□□□□□ -1.12
VPS71YML041C TIF11P38912 153 aaKnown RBP8.04□□□□□ -1.12
VPS71YML041C VMA1P17255 1071 aaKnown RBP8.02□□□□□ -1.13
VPS71YML041C NOP53Q12080 455 aaKnown RBP8□□□□□ -1.13
VPS71YML041C SPB4P25808 606 aaPredicted RBP7.99□□□□□ -1.13
VPS71YML041C YOL036WQ08206 761 aa7.98□□□□□ -1.13
VPS71YML041C COQ8P27697 501 aa7.97□□□□□ -1.13
VPS71YML041C DSF2P38213 736 aa7.97□□□□□ -1.13
VPS71YML041C ULI1P43604 169 aa7.97□□□□□ -1.13
VPS71YML041C SAM3Q08986 587 aa7.97□□□□□ -1.13
VPS71YML041C MSB4Q12317 492 aa7.97□□□□□ -1.13
VPS71YML041C SET4P42948 560 aa7.96□□□□□ -1.14
VPS71YML041C IOC2Q12072 812 aa7.95□□□□□ -1.14
VPS71YML041C DMA2P53924 522 aa7.93□□□□□ -1.14
VPS71YML041C EAP1P36041 632 aaKnown RBP7.91□□□□□ -1.14
VPS71YML041C EDS1P38073 919 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms