RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W FAP1P53971 965 aa11.41□□□□□ -0.58
CTK1YKL139W DRS1P32892 752 aaKnown RBP11.3□□□□□ -0.6
CTK1YKL139W MTC1P47018 478 aaKnown RBP10.94□□□□□ -0.66
CTK1YKL139W PRY3P47033 881 aa10.74□□□□□ -0.69
CTK1YKL139W AAD16Q02895 342 aa10.11□□□□□ -0.79
CTK1YKL139W HAA1Q12753 694 aaKnown RBP10.03□□□□□ -0.8
CTK1YKL139W BFR2Q06631 534 aaKnown RBP10□□□□□ -0.81
CTK1YKL139W PRI1P10363 409 aa9.97□□□□□ -0.81
CTK1YKL139W YCK3P39962 524 aa9.97□□□□□ -0.81
CTK1YKL139W TFA1P36100 482 aa9.74□□□□□ -0.85
CTK1YKL139W AVT3P36062 692 aa9.46□□□□□ -0.9
CTK1YKL139W DIP2Q12220 943 aaPredicted RBP9.44□□□□□ -0.9
CTK1YKL139W ISW2Q08773 1120 aa9.42□□□□□ -0.9
CTK1YKL139W TSR3Q12094 313 aaKnown RBP9.35□□□□□ -0.91
CTK1YKL139W RPG1P38249 964 aaKnown RBP9.32□□□□□ -0.92
CTK1YKL139W MRPL32P25348 183 aa9.06□□□□□ -0.96
CTK1YKL139W YGL015CP33199 130 aa9.06□□□□□ -0.96
CTK1YKL139W BUD31P25337 157 aaPredicted RBP8.83□□□□□ -1
CTK1YKL139W RSE1Q04693 1361 aaKnown RBP8.77□□□□□ -1.01
CTK1YKL139W RQC2Q12532 1038 aaKnown RBP8.76□□□□□ -1.01
CTK1YKL139W RPL17AP05740 184 aaKnown RBP8.42□□□□□ -1.06
CTK1YKL139W RPL17BP46990 184 aaKnown RBP8.42□□□□□ -1.06
CTK1YKL139W REB1P21538 810 aa8.35□□□□□ -1.07
CTK1YKL139W SIS1P25294 352 aaKnown RBP8.35□□□□□ -1.07
CTK1YKL139W UBP10P53874 792 aaPredicted RBP8.27□□□□□ -1.09
CTK1YKL139W CDC27P38042 758 aa8.27□□□□□ -1.09
CTK1YKL139W DMA1P38823 416 aa8.24□□□□□ -1.09
CTK1YKL139W PTP3P40048 928 aa8.21□□□□□ -1.1
CTK1YKL139W MAP2P38174 421 aaKnown RBP8.18□□□□□ -1.1
CTK1YKL139W UBP9P39967 754 aa8.16□□□□□ -1.1
CTK1YKL139W SPT21P35209 758 aa8.14□□□□□ -1.11
CTK1YKL139W RIM101P33400 625 aa8.14□□□□□ -1.11
CTK1YKL139W SSP1P38871 571 aa8□□□□□ -1.13
CTK1YKL139W TIF4632P39936 914 aaKnown RBP7.99□□□□□ -1.13
CTK1YKL139W TGL3P40308 642 aa7.94□□□□□ -1.14
CTK1YKL139W YKR023WP36119 530 aaKnown RBP7.93□□□□□ -1.14
CTK1YKL139W OXP1P28273 1286 aa7.92□□□□□ -1.14
CTK1YKL139W YAH1Q12184 172 aaKnown RBP7.88□□□□□ -1.15
CTK1YKL139W TAF7Q05021 590 aa7.85□□□□□ -1.15
CTK1YKL139W SLX5P32828 619 aaKnown RBP7.81□□□□□ -1.16
CTK1YKL139W SCY1P53009 804 aa7.81□□□□□ -1.16
CTK1YKL139W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
CTK1YKL139W HOP09932 586 aa7.79□□□□□ -1.16
CTK1YKL139W YIL055CP40523 627 aaKnown RBP7.79□□□□□ -1.16
CTK1YKL139W YLR271WQ06152 274 aa7.78□□□□□ -1.16
CTK1YKL139W TFC8Q12308 588 aa7.78□□□□□ -1.16
CTK1YKL139W DCD1P06773 312 aa7.77□□□□□ -1.17
CTK1YKL139W LEO1P38439 464 aa7.71□□□□□ -1.17
CTK1YKL139W MGA2P40578 1113 aa7.67□□□□□ -1.18
CTK1YKL139W RSM7P47150 247 aa7.67□□□□□ -1.18
CTK1YKL139W SAS10Q12136 610 aaPredicted RBP7.61□□□□□ -1.19
CTK1YKL139W CST9Q06032 482 aa7.59□□□□□ -1.2
CTK1YKL139W LEU3P08638 886 aa7.54□□□□□ -1.2
CTK1YKL139W PSD2P53037 1138 aaKnown RBP7.51□□□□□ -1.21
CTK1YKL139W YBL029C-AQ3E756 94 aa7.51□□□□□ -1.21
CTK1YKL139W AI2P03876 854 aa7.5□□□□□ -1.21
CTK1YKL139W BCH2P36122 765 aa7.48□□□□□ -1.21
CTK1YKL139W MST1P07236 462 aa7.42□□□□□ -1.22
CTK1YKL139W YJL171CP46992 396 aa7.4□□□□□ -1.22
CTK1YKL139W BBC1P47068 1157 aa7.4□□□□□ -1.22
CTK1YKL139W VNX1P42839 908 aa7.38□□□□□ -1.23
CTK1YKL139W YOR238WQ08634 303 aa7.37□□□□□ -1.23
CTK1YKL139W RAM2P29703 316 aa7.36□□□□□ -1.23
CTK1YKL139W SPP1Q03012 353 aa7.35□□□□□ -1.23
CTK1YKL139W SET1P38827 1080 aaKnown RBP7.32□□□□□ -1.24
CTK1YKL139W EPS1P40557 701 aa7.32□□□□□ -1.24
CTK1YKL139W MRM1P25270 412 aa7.31□□□□□ -1.24
CTK1YKL139W RPN1P38764 993 aaKnown RBP7.3□□□□□ -1.24
CTK1YKL139W AIR2Q12476 344 aaKnown RBP7.29□□□□□ -1.24
CTK1YKL139W RCR1P38212 213 aa7.29□□□□□ -1.24
CTK1YKL139W SPB4P25808 606 aaPredicted RBP7.26□□□□□ -1.25
CTK1YKL139W VPS70P47161 811 aa7.26□□□□□ -1.25
CTK1YKL139W BDF1P35817 686 aa7.25□□□□□ -1.25
CTK1YKL139W CKB1P43639 278 aa7.25□□□□□ -1.25
CTK1YKL139W YPR148CQ06523 435 aa7.25□□□□□ -1.25
CTK1YKL139W RTG3P38165 486 aa7.22□□□□□ -1.25
CTK1YKL139W FKH1P40466 484 aa7.22□□□□□ -1.25
CTK1YKL139W DMA2P53924 522 aa7.22□□□□□ -1.25
CTK1YKL139W WSC3Q12215 556 aa7.22□□□□□ -1.25
CTK1YKL139W IFH1P39520 1085 aa7.2□□□□□ -1.26
CTK1YKL139W MAK11P20484 414 aaKnown RBP7.18□□□□□ -1.26
CTK1YKL139W NSR1P27476 414 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
CTK1YKL139W TIF11P38912 153 aaKnown RBP7.16□□□□□ -1.26
CTK1YKL139W BMT6Q12291 365 aa7.14□□□□□ -1.27
CTK1YKL139W YAP5P40574 245 aa7.13□□□□□ -1.27
CTK1YKL139W PBS2P08018 668 aa7.1□□□□□ -1.27
CTK1YKL139W DSF2P38213 736 aa7.1□□□□□ -1.27
CTK1YKL139W VPS29P38759 282 aa7.1□□□□□ -1.27
CTK1YKL139W COQ8P27697 501 aa7.09□□□□□ -1.27
CTK1YKL139W LDB19Q12502 818 aa7.06□□□□□ -1.28
CTK1YKL139W GTT3P39996 337 aa7.05□□□□□ -1.28
CTK1YKL139W ABP1P15891 592 aaKnown RBP7.02□□□□□ -1.29
CTK1YKL139W MIF2P35201 549 aa7.02□□□□□ -1.29
CTK1YKL139W YNR021WP53723 404 aaKnown RBP7.02□□□□□ -1.29
CTK1YKL139W YMR1P47147 688 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
CTK1YKL139W KIN1P13185 1064 aa7□□□□□ -1.29
CTK1YKL139W STS1P38637 319 aa7□□□□□ -1.29
CTK1YKL139W ULI1P43604 169 aa7□□□□□ -1.29
CTK1YKL139W NOP53Q12080 455 aaKnown RBP7□□□□□ -1.29
CTK1YKL139W EDS1P38073 919 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms