RNA–Protein interactions for RNA: YKL090W

CUE2, Transcript of Protein of unknown function, yeastyeast

Gene CUE2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE2YKL090W MTC1P47018 478 aaKnown RBP13.55□□□□□ -0.24
CUE2YKL090W FAP1P53971 965 aa13.37□□□□□ -0.27
CUE2YKL090W PRY3P47033 881 aa12.59□□□□□ -0.39
CUE2YKL090W AAD16Q02895 342 aa12□□□□□ -0.49
CUE2YKL090W PRI1P10363 409 aa11.96□□□□□ -0.49
CUE2YKL090W YCK3P39962 524 aa11.82□□□□□ -0.52
CUE2YKL090W DRS1P32892 752 aaKnown RBP11.68□□□□□ -0.54
CUE2YKL090W HAA1Q12753 694 aaKnown RBP11.67□□□□□ -0.54
CUE2YKL090W ISW2Q08773 1120 aa11.42□□□□□ -0.58
CUE2YKL090W RPG1P38249 964 aaKnown RBP11.36□□□□□ -0.59
CUE2YKL090W TSR3Q12094 313 aaKnown RBP11.29□□□□□ -0.6
CUE2YKL090W MRPL32P25348 183 aa10.82□□□□□ -0.68
CUE2YKL090W YGL015CP33199 130 aa10.62□□□□□ -0.71
CUE2YKL090W DIP2Q12220 943 aaPredicted RBP10.58□□□□□ -0.72
CUE2YKL090W RSE1Q04693 1361 aaKnown RBP10.49□□□□□ -0.73
CUE2YKL090W REB1P21538 810 aa10.31□□□□□ -0.76
CUE2YKL090W RPL17AP05740 184 aaKnown RBP10.25□□□□□ -0.77
CUE2YKL090W RPL17BP46990 184 aaKnown RBP10.25□□□□□ -0.77
CUE2YKL090W BUD31P25337 157 aaPredicted RBP10.18□□□□□ -0.78
CUE2YKL090W CDC27P38042 758 aa10.1□□□□□ -0.79
CUE2YKL090W UBP10P53874 792 aaPredicted RBP9.96□□□□□ -0.82
CUE2YKL090W AVT3P36062 692 aa9.95□□□□□ -0.82
CUE2YKL090W MAP2P38174 421 aaKnown RBP9.91□□□□□ -0.82
CUE2YKL090W YKR023WP36119 530 aaKnown RBP9.84□□□□□ -0.83
CUE2YKL090W SPT21P35209 758 aa9.76□□□□□ -0.85
CUE2YKL090W DCD1P06773 312 aa9.68□□□□□ -0.86
CUE2YKL090W HOP09932 586 aa9.67□□□□□ -0.86
CUE2YKL090W TFC8Q12308 588 aa9.65□□□□□ -0.86
CUE2YKL090W SIS1P25294 352 aaKnown RBP9.63□□□□□ -0.87
CUE2YKL090W SCY1P53009 804 aa9.55□□□□□ -0.88
CUE2YKL090W TIF4632P39936 914 aaKnown RBP9.53□□□□□ -0.88
CUE2YKL090W TGL3P40308 642 aa9.53□□□□□ -0.88
CUE2YKL090W UBP9P39967 754 aa9.5□□□□□ -0.89
CUE2YKL090W SLX5P32828 619 aaKnown RBP9.46□□□□□ -0.9
CUE2YKL090W BCH2P36122 765 aa9.29□□□□□ -0.92
CUE2YKL090W BFR2Q06631 534 aaKnown RBP9.24□□□□□ -0.93
CUE2YKL090W RIM101P33400 625 aa9.2□□□□□ -0.94
CUE2YKL090W MST1P07236 462 aa9.05□□□□□ -0.96
CUE2YKL090W YBL029C-AQ3E756 94 aa9.03□□□□□ -0.96
CUE2YKL090W BDF1P35817 686 aa8.98□□□□□ -0.97
CUE2YKL090W EPS1P40557 701 aa8.98□□□□□ -0.97
CUE2YKL090W YOR238WQ08634 303 aa8.92□□□□□ -0.98
CUE2YKL090W VNX1P42839 908 aa8.88□□□□□ -0.99
CUE2YKL090W NSR1P27476 414 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
CUE2YKL090W OXP1P28273 1286 aa8.84□□□□□ -0.99
CUE2YKL090W SPP1Q03012 353 aa8.79□□□□□ -1
CUE2YKL090W WSC3Q12215 556 aa8.78□□□□□ -1
CUE2YKL090W PTP3P40048 928 aa8.77□□□□□ -1.01
CUE2YKL090W YAP5P40574 245 aa8.73□□□□□ -1.01
CUE2YKL090W AIR2Q12476 344 aaKnown RBP8.73□□□□□ -1.01
CUE2YKL090W YIL055CP40523 627 aaKnown RBP8.71□□□□□ -1.02
CUE2YKL090W YJL171CP46992 396 aa8.69□□□□□ -1.02
CUE2YKL090W FKH1P40466 484 aa8.68□□□□□ -1.02
CUE2YKL090W TIF11P38912 153 aaKnown RBP8.64□□□□□ -1.03
CUE2YKL090W BBC1P47068 1157 aa8.64□□□□□ -1.03
CUE2YKL090W SGS1P35187 1447 aa8.64□□□□□ -1.03
CUE2YKL090W RSM7P47150 247 aa8.58□□□□□ -1.04
CUE2YKL090W AI2P03876 854 aa8.57□□□□□ -1.04
CUE2YKL090W GTT3P39996 337 aa8.57□□□□□ -1.04
CUE2YKL090W LDB19Q12502 818 aa8.52□□□□□ -1.05
CUE2YKL090W TFA1P36100 482 aa8.49□□□□□ -1.05
CUE2YKL090W IOC2Q12072 812 aa8.49□□□□□ -1.05
CUE2YKL090W YAH1Q12184 172 aaKnown RBP8.49□□□□□ -1.05
CUE2YKL090W BMT6Q12291 365 aa8.48□□□□□ -1.05
CUE2YKL090W ULI1P43604 169 aa8.47□□□□□ -1.05
CUE2YKL090W SPA2P23201 1466 aaKnown RBP8.47□□□□□ -1.05
CUE2YKL090W PIB1Q06651 286 aa8.45□□□□□ -1.06
CUE2YKL090W INO80P53115 1489 aa8.4□□□□□ -1.06
CUE2YKL090W SSN2P38931 1420 aa8.38□□□□□ -1.07
CUE2YKL090W MSB4Q12317 492 aa8.35□□□□□ -1.07
CUE2YKL090W EAP1P36041 632 aaKnown RBP8.3□□□□□ -1.08
CUE2YKL090W PSD2P53037 1138 aaKnown RBP8.28□□□□□ -1.08
CUE2YKL090W RTG1P32607 177 aa8.27□□□□□ -1.09
CUE2YKL090W YLR271WQ06152 274 aa8.27□□□□□ -1.09
CUE2YKL090W NCR1Q12200 1170 aa8.25□□□□□ -1.09
CUE2YKL090W TRP5P00931 707 aaKnown RBP8.24□□□□□ -1.09
CUE2YKL090W SET4P42948 560 aa8.24□□□□□ -1.09
CUE2YKL090W YOL036WQ08206 761 aa8.24□□□□□ -1.09
CUE2YKL090W MRM1P25270 412 aa8.23□□□□□ -1.09
CUE2YKL090W TCB3Q03640 1545 aaKnown RBP8.2□□□□□ -1.1
CUE2YKL090W SEC61P32915 480 aa8.19□□□□□ -1.1
CUE2YKL090W YNL035CP53962 389 aaKnown RBP8.19□□□□□ -1.1
CUE2YKL090W TY1B-DR4Q07793 1604 aa8.12□□□□□ -1.11
CUE2YKL090W YMR1P47147 688 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
CUE2YKL090W DBP1P24784 617 aaKnown RBP8.09□□□□□ -1.11
CUE2YKL090W VPS29P38759 282 aa8.08□□□□□ -1.12
CUE2YKL090W YFR006WP43590 535 aa8.08□□□□□ -1.12
CUE2YKL090W SAM3Q08986 587 aa8.08□□□□□ -1.12
CUE2YKL090W VMA1P17255 1071 aaKnown RBP8.07□□□□□ -1.12
CUE2YKL090W TFG1P41895 735 aaPredicted RBP8.06□□□□□ -1.12
CUE2YKL090W BCK2P33306 851 aa8.05□□□□□ -1.12
CUE2YKL090W SAP30P38429 201 aa8.04□□□□□ -1.12
CUE2YKL090W RQC2Q12532 1038 aaKnown RBP8.03□□□□□ -1.12
CUE2YKL090W DAN4P47179 1161 aa8.03□□□□□ -1.12
CUE2YKL090W HSL1P34244 1518 aa8.02□□□□□ -1.13
CUE2YKL090W STS1P38637 319 aa8.02□□□□□ -1.13
CUE2YKL090W CHL1P22516 861 aaPredicted RBP8□□□□□ -1.13
CUE2YKL090W JIP4Q03361 876 aa8□□□□□ -1.13
CUE2YKL090W RTG3P38165 486 aa7.98□□□□□ -1.13
CUE2YKL090W YDL129WQ07555 291 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms