RNA–Protein interactions for RNA: YIL088C

AVT7, Transcript of Putative transporter, yeastyeast

Gene AVT7, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT7YIL088C MTC1P47018 478 aaKnown RBP11.31□□□□□ -0.6
AVT7YIL088C FAP1P53971 965 aa11.19□□□□□ -0.62
AVT7YIL088C PRY3P47033 881 aa10.56□□□□□ -0.72
AVT7YIL088C DRS1P32892 752 aaKnown RBP10.14□□□□□ -0.79
AVT7YIL088C AAD16Q02895 342 aa10.1□□□□□ -0.79
AVT7YIL088C PRI1P10363 409 aa10.06□□□□□ -0.8
AVT7YIL088C YCK3P39962 524 aa10.04□□□□□ -0.8
AVT7YIL088C HAA1Q12753 694 aaKnown RBP9.85□□□□□ -0.83
AVT7YIL088C ISW2Q08773 1120 aa9.53□□□□□ -0.88
AVT7YIL088C RPG1P38249 964 aaKnown RBP9.52□□□□□ -0.89
AVT7YIL088C TSR3Q12094 313 aaKnown RBP9.47□□□□□ -0.89
AVT7YIL088C MRPL32P25348 183 aa9.07□□□□□ -0.96
AVT7YIL088C YGL015CP33199 130 aa8.95□□□□□ -0.98
AVT7YIL088C BUD31P25337 157 aaPredicted RBP8.86□□□□□ -0.99
AVT7YIL088C DIP2Q12220 943 aaPredicted RBP8.84□□□□□ -0.99
AVT7YIL088C RSE1Q04693 1361 aaKnown RBP8.74□□□□□ -1.01
AVT7YIL088C REB1P21538 810 aa8.56□□□□□ -1.04
AVT7YIL088C RPL17AP05740 184 aaKnown RBP8.54□□□□□ -1.04
AVT7YIL088C RPL17BP46990 184 aaKnown RBP8.54□□□□□ -1.04
AVT7YIL088C AVT3P36062 692 aa8.52□□□□□ -1.05
AVT7YIL088C BFR2Q06631 534 aaKnown RBP8.51□□□□□ -1.05
AVT7YIL088C CDC27P38042 758 aa8.5□□□□□ -1.05
AVT7YIL088C MAP2P38174 421 aaKnown RBP8.32□□□□□ -1.08
AVT7YIL088C UBP10P53874 792 aaPredicted RBP8.32□□□□□ -1.08
AVT7YIL088C SIS1P25294 352 aaKnown RBP8.27□□□□□ -1.09
AVT7YIL088C YKR023WP36119 530 aaKnown RBP8.26□□□□□ -1.09
AVT7YIL088C SPT21P35209 758 aa8.12□□□□□ -1.11
AVT7YIL088C DCD1P06773 312 aa8.08□□□□□ -1.12
AVT7YIL088C HOP09932 586 aa8.08□□□□□ -1.12
AVT7YIL088C TFC8Q12308 588 aa8.07□□□□□ -1.12
AVT7YIL088C TGL3P40308 642 aa7.98□□□□□ -1.13
AVT7YIL088C SCY1P53009 804 aa7.98□□□□□ -1.13
AVT7YIL088C UBP9P39967 754 aa7.97□□□□□ -1.13
AVT7YIL088C TIF4632P39936 914 aaKnown RBP7.96□□□□□ -1.13
AVT7YIL088C SLX5P32828 619 aaKnown RBP7.91□□□□□ -1.14
AVT7YIL088C BCH2P36122 765 aa7.78□□□□□ -1.16
AVT7YIL088C RIM101P33400 625 aa7.64□□□□□ -1.19
AVT7YIL088C TFA1P36100 482 aa7.61□□□□□ -1.19
AVT7YIL088C YBL029C-AQ3E756 94 aa7.57□□□□□ -1.2
AVT7YIL088C MST1P07236 462 aa7.55□□□□□ -1.2
AVT7YIL088C BDF1P35817 686 aa7.51□□□□□ -1.21
AVT7YIL088C EPS1P40557 701 aa7.5□□□□□ -1.21
AVT7YIL088C YOR238WQ08634 303 aa7.46□□□□□ -1.22
AVT7YIL088C VNX1P42839 908 aa7.45□□□□□ -1.22
AVT7YIL088C OXP1P28273 1286 aa7.37□□□□□ -1.23
AVT7YIL088C YIL055CP40523 627 aaKnown RBP7.36□□□□□ -1.23
AVT7YIL088C SPP1Q03012 353 aa7.36□□□□□ -1.23
AVT7YIL088C NSR1P27476 414 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
AVT7YIL088C AIR2Q12476 344 aaKnown RBP7.33□□□□□ -1.24
AVT7YIL088C PTP3P40048 928 aa7.31□□□□□ -1.24
AVT7YIL088C WSC3Q12215 556 aa7.31□□□□□ -1.24
AVT7YIL088C YAP5P40574 245 aa7.27□□□□□ -1.25
AVT7YIL088C FKH1P40466 484 aa7.26□□□□□ -1.25
AVT7YIL088C YJL171CP46992 396 aa7.26□□□□□ -1.25
AVT7YIL088C TIF11P38912 153 aaKnown RBP7.24□□□□□ -1.25
AVT7YIL088C BBC1P47068 1157 aa7.2□□□□□ -1.26
AVT7YIL088C RSM7P47150 247 aa7.18□□□□□ -1.26
AVT7YIL088C YAH1Q12184 172 aaKnown RBP7.15□□□□□ -1.27
AVT7YIL088C AI2P03876 854 aa7.14□□□□□ -1.27
AVT7YIL088C LDB19Q12502 818 aa7.13□□□□□ -1.27
AVT7YIL088C GTT3P39996 337 aa7.11□□□□□ -1.27
AVT7YIL088C IOC2Q12072 812 aa7.11□□□□□ -1.27
AVT7YIL088C ULI1P43604 169 aa7.1□□□□□ -1.27
AVT7YIL088C BMT6Q12291 365 aa7.1□□□□□ -1.27
AVT7YIL088C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
AVT7YIL088C RQC2Q12532 1038 aaKnown RBP7.1□□□□□ -1.27
AVT7YIL088C SSP1P38871 571 aa7.04□□□□□ -1.28
AVT7YIL088C PIB1Q06651 286 aa7.03□□□□□ -1.28
AVT7YIL088C YLR271WQ06152 274 aa7.01□□□□□ -1.29
AVT7YIL088C PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
AVT7YIL088C RTG1P32607 177 aa6.92□□□□□ -1.3
AVT7YIL088C MSB4Q12317 492 aa6.92□□□□□ -1.3
AVT7YIL088C NCR1Q12200 1170 aa6.91□□□□□ -1.3
AVT7YIL088C EAP1P36041 632 aaKnown RBP6.9□□□□□ -1.31
AVT7YIL088C MGA2P40578 1113 aa6.89□□□□□ -1.31
AVT7YIL088C TRP5P00931 707 aaKnown RBP6.88□□□□□ -1.31
AVT7YIL088C SET4P42948 560 aa6.86□□□□□ -1.31
AVT7YIL088C YOL036WQ08206 761 aa6.86□□□□□ -1.31
AVT7YIL088C RGA2Q06407 1009 aa6.85□□□□□ -1.31
AVT7YIL088C MRM1P25270 412 aa6.84□□□□□ -1.31
AVT7YIL088C SEC61P32915 480 aa6.82□□□□□ -1.32
AVT7YIL088C YNL035CP53962 389 aaKnown RBP6.82□□□□□ -1.32
AVT7YIL088C RTG3P38165 486 aa6.77□□□□□ -1.33
AVT7YIL088C CST9Q06032 482 aa6.75□□□□□ -1.33
AVT7YIL088C DBP1P24784 617 aaKnown RBP6.74□□□□□ -1.33
AVT7YIL088C BCK2P33306 851 aa6.73□□□□□ -1.33
AVT7YIL088C VPS29P38759 282 aa6.73□□□□□ -1.33
AVT7YIL088C YMR1P47147 688 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
AVT7YIL088C YFR006WP43590 535 aa6.73□□□□□ -1.33
AVT7YIL088C VMA1P17255 1071 aaKnown RBP6.72□□□□□ -1.33
AVT7YIL088C SAP30P38429 201 aa6.72□□□□□ -1.33
AVT7YIL088C SAM3Q08986 587 aa6.71□□□□□ -1.34
AVT7YIL088C DAN4P47179 1161 aa6.7□□□□□ -1.34
AVT7YIL088C TFG1P41895 735 aaPredicted RBP6.69□□□□□ -1.34
AVT7YIL088C CHL1P22516 861 aaPredicted RBP6.66□□□□□ -1.34
AVT7YIL088C STS1P38637 319 aa6.66□□□□□ -1.34
AVT7YIL088C YDL129WQ07555 291 aa6.64□□□□□ -1.35
AVT7YIL088C JIP4Q03361 876 aa6.63□□□□□ -1.35
AVT7YIL088C PRE3P38624 215 aa6.62□□□□□ -1.35
AVT7YIL088C ABP1P15891 592 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms