RNA–Protein interactions for RNA: YGR284C

ERV29, Transcript of Protein localized to COPII-coated vesicles, yeastyeast

Gene ERV29, Length 933 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERV29YGR284C MTC1P47018 478 aaKnown RBP18.49■□□□□ 0.55
ERV29YGR284C FAP1P53971 965 aa17.89■□□□□ 0.45
ERV29YGR284C PRY3P47033 881 aa16.86■□□□□ 0.29
ERV29YGR284C AAD16Q02895 342 aa16.25■□□□□ 0.19
ERV29YGR284C PRI1P10363 409 aa16.21■□□□□ 0.19
ERV29YGR284C DRS1P32892 752 aaKnown RBP16.17■□□□□ 0.18
ERV29YGR284C YCK3P39962 524 aa15.86■□□□□ 0.13
ERV29YGR284C HAA1Q12753 694 aaKnown RBP15.76■□□□□ 0.11
ERV29YGR284C ISW2Q08773 1120 aa15.58■□□□□ 0.08
ERV29YGR284C RPG1P38249 964 aaKnown RBP15.44■□□□□ 0.06
ERV29YGR284C TSR3Q12094 313 aaKnown RBP15.26■□□□□ 0.03
ERV29YGR284C MRPL32P25348 183 aa14.68□□□□□ -0.06
ERV29YGR284C DIP2Q12220 943 aaPredicted RBP14.57□□□□□ -0.08
ERV29YGR284C RSE1Q04693 1361 aaKnown RBP14.4□□□□□ -0.1
ERV29YGR284C YGL015CP33199 130 aa14.38□□□□□ -0.11
ERV29YGR284C REB1P21538 810 aa14.07□□□□□ -0.16
ERV29YGR284C RPL17AP05740 184 aaKnown RBP14.02□□□□□ -0.17
ERV29YGR284C RPL17BP46990 184 aaKnown RBP14.02□□□□□ -0.17
ERV29YGR284C AVT3P36062 692 aa13.73□□□□□ -0.21
ERV29YGR284C CDC27P38042 758 aa13.73□□□□□ -0.21
ERV29YGR284C BUD31P25337 157 aaPredicted RBP13.67□□□□□ -0.22
ERV29YGR284C UBP10P53874 792 aaPredicted RBP13.5□□□□□ -0.25
ERV29YGR284C MAP2P38174 421 aaKnown RBP13.44□□□□□ -0.26
ERV29YGR284C YKR023WP36119 530 aaKnown RBP13.43□□□□□ -0.26
ERV29YGR284C SPT21P35209 758 aa13.33□□□□□ -0.28
ERV29YGR284C TFC8Q12308 588 aa13.16□□□□□ -0.3
ERV29YGR284C HOP09932 586 aa13.15□□□□□ -0.3
ERV29YGR284C DCD1P06773 312 aa13.13□□□□□ -0.31
ERV29YGR284C SCY1P53009 804 aa12.98□□□□□ -0.33
ERV29YGR284C TIF4632P39936 914 aaKnown RBP12.97□□□□□ -0.33
ERV29YGR284C SIS1P25294 352 aaKnown RBP12.92□□□□□ -0.34
ERV29YGR284C TGL3P40308 642 aa12.92□□□□□ -0.34
ERV29YGR284C BFR2Q06631 534 aaKnown RBP12.92□□□□□ -0.34
ERV29YGR284C SLX5P32828 619 aaKnown RBP12.89□□□□□ -0.35
ERV29YGR284C UBP9P39967 754 aa12.87□□□□□ -0.35
ERV29YGR284C BCH2P36122 765 aa12.68□□□□□ -0.38
ERV29YGR284C RIM101P33400 625 aa12.61□□□□□ -0.39
ERV29YGR284C EPS1P40557 701 aa12.3□□□□□ -0.44
ERV29YGR284C BDF1P35817 686 aa12.27□□□□□ -0.45
ERV29YGR284C MST1P07236 462 aa12.24□□□□□ -0.45
ERV29YGR284C YBL029C-AQ3E756 94 aa12.22□□□□□ -0.45
ERV29YGR284C YOR238WQ08634 303 aa12.16□□□□□ -0.46
ERV29YGR284C OXP1P28273 1286 aa12.15□□□□□ -0.46
ERV29YGR284C VNX1P42839 908 aa12.04□□□□□ -0.48
ERV29YGR284C NSR1P27476 414 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
ERV29YGR284C PTP3P40048 928 aa12.03□□□□□ -0.48
ERV29YGR284C YIL055CP40523 627 aaKnown RBP11.99□□□□□ -0.49
ERV29YGR284C SPP1Q03012 353 aa11.94□□□□□ -0.5
ERV29YGR284C YAP5P40574 245 aa11.92□□□□□ -0.5
ERV29YGR284C BBC1P47068 1157 aa11.89□□□□□ -0.51
ERV29YGR284C WSC3Q12215 556 aa11.87□□□□□ -0.51
ERV29YGR284C RSM7P47150 247 aa11.81□□□□□ -0.52
ERV29YGR284C AI2P03876 854 aa11.79□□□□□ -0.52
ERV29YGR284C AIR2Q12476 344 aaKnown RBP11.79□□□□□ -0.52
ERV29YGR284C YJL171CP46992 396 aa11.76□□□□□ -0.53
ERV29YGR284C TIF11P38912 153 aaKnown RBP11.75□□□□□ -0.53
ERV29YGR284C FKH1P40466 484 aa11.75□□□□□ -0.53
ERV29YGR284C GTT3P39996 337 aa11.7□□□□□ -0.54
ERV29YGR284C YAH1Q12184 172 aaKnown RBP11.65□□□□□ -0.54
ERV29YGR284C LDB19Q12502 818 aa11.58□□□□□ -0.56
ERV29YGR284C ULI1P43604 169 aa11.55□□□□□ -0.56
ERV29YGR284C IOC2Q12072 812 aa11.51□□□□□ -0.57
ERV29YGR284C BMT6Q12291 365 aa11.51□□□□□ -0.57
ERV29YGR284C PIB1Q06651 286 aa11.47□□□□□ -0.57
ERV29YGR284C YLR271WQ06152 274 aa11.41□□□□□ -0.58
ERV29YGR284C MSB4Q12317 492 aa11.38□□□□□ -0.59
ERV29YGR284C PSD2P53037 1138 aaKnown RBP11.37□□□□□ -0.59
ERV29YGR284C EAP1P36041 632 aaKnown RBP11.34□□□□□ -0.59
ERV29YGR284C MRM1P25270 412 aa11.31□□□□□ -0.6
ERV29YGR284C RTG1P32607 177 aa11.28□□□□□ -0.6
ERV29YGR284C YOL036WQ08206 761 aa11.25□□□□□ -0.61
ERV29YGR284C SET4P42948 560 aa11.24□□□□□ -0.61
ERV29YGR284C TRP5P00931 707 aaKnown RBP11.23□□□□□ -0.61
ERV29YGR284C NCR1Q12200 1170 aa11.23□□□□□ -0.61
ERV29YGR284C YNL035CP53962 389 aaKnown RBP11.16□□□□□ -0.62
ERV29YGR284C SEC61P32915 480 aa11.15□□□□□ -0.62
ERV29YGR284C YMR1P47147 688 aaKnown RBP RIP-Chip data11.14□□□□□ -0.63not detected
ERV29YGR284C DBP1P24784 617 aaKnown RBP11.11□□□□□ -0.63
ERV29YGR284C TFA1P36100 482 aa11.08□□□□□ -0.64
ERV29YGR284C VPS29P38759 282 aa11.08□□□□□ -0.64
ERV29YGR284C VMA1P17255 1071 aaKnown RBP11.06□□□□□ -0.64
ERV29YGR284C YFR006WP43590 535 aa11.06□□□□□ -0.64
ERV29YGR284C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.05□□□□□ -0.64not detected
ERV29YGR284C SAM3Q08986 587 aa11.04□□□□□ -0.64
ERV29YGR284C TFG1P41895 735 aaPredicted RBP11.02□□□□□ -0.65
ERV29YGR284C STS1P38637 319 aa11□□□□□ -0.65
ERV29YGR284C RTG3P38165 486 aa10.99□□□□□ -0.65
ERV29YGR284C SSP1P38871 571 aa10.98□□□□□ -0.65
ERV29YGR284C SAP30P38429 201 aa10.95□□□□□ -0.66
ERV29YGR284C CST9Q06032 482 aa10.94□□□□□ -0.66
ERV29YGR284C BCK2P33306 851 aa10.93□□□□□ -0.66
ERV29YGR284C DAN4P47179 1161 aa10.93□□□□□ -0.66
ERV29YGR284C JIP4Q03361 876 aa10.91□□□□□ -0.66
ERV29YGR284C YDL129WQ07555 291 aa10.88□□□□□ -0.67
ERV29YGR284C ABP1P15891 592 aaKnown RBP10.87□□□□□ -0.67
ERV29YGR284C CHL1P22516 861 aaPredicted RBP10.87□□□□□ -0.67
ERV29YGR284C MGA2P40578 1113 aa10.85□□□□□ -0.67
ERV29YGR284C GYP5Q12344 894 aa10.83□□□□□ -0.68
ERV29YGR284C PRE3P38624 215 aa10.81□□□□□ -0.68
ERV29YGR284C HTA1P04911 132 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms