RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeastyeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NNF2YGR089W MTC1P47018 478 aaKnown RBP4.82□□□□□ -1.64
NNF2YGR089W FAP1P53971 965 aa4.82□□□□□ -1.64
NNF2YGR089W PRY3P47033 881 aa4.51□□□□□ -1.69
NNF2YGR089W AAD16Q02895 342 aa4.32□□□□□ -1.72
NNF2YGR089W PRI1P10363 409 aa4.24□□□□□ -1.73
NNF2YGR089W HAA1Q12753 694 aaKnown RBP4.24□□□□□ -1.73
NNF2YGR089W DRS1P32892 752 aaKnown RBP4.2□□□□□ -1.74
NNF2YGR089W ISW2Q08773 1120 aa4.16□□□□□ -1.74
NNF2YGR089W RPG1P38249 964 aaKnown RBP4.07□□□□□ -1.76
NNF2YGR089W YCK3P39962 524 aa4.05□□□□□ -1.76
NNF2YGR089W TSR3Q12094 313 aaKnown RBP4.02□□□□□ -1.77
NNF2YGR089W MRPL32P25348 183 aa3.94□□□□□ -1.78
NNF2YGR089W BUD31P25337 157 aaPredicted RBP3.9□□□□□ -1.79
NNF2YGR089W YGL015CP33199 130 aa3.87□□□□□ -1.79
NNF2YGR089W SIS1P25294 352 aaKnown RBP3.81□□□□□ -1.8
NNF2YGR089W RSE1Q04693 1361 aaKnown RBP3.81□□□□□ -1.8
NNF2YGR089W DIP2Q12220 943 aaPredicted RBP3.8□□□□□ -1.8
NNF2YGR089W REB1P21538 810 aa3.76□□□□□ -1.81
NNF2YGR089W RPL17AP05740 184 aaKnown RBP3.69□□□□□ -1.82
NNF2YGR089W RPL17BP46990 184 aaKnown RBP3.69□□□□□ -1.82
NNF2YGR089W UBP10P53874 792 aaPredicted RBP3.57□□□□□ -1.84
NNF2YGR089W CDC27P38042 758 aa3.55□□□□□ -1.84
NNF2YGR089W UBP9P39967 754 aa3.52□□□□□ -1.85
NNF2YGR089W MAP2P38174 421 aaKnown RBP3.51□□□□□ -1.85
NNF2YGR089W TIF4632P39936 914 aaKnown RBP3.5□□□□□ -1.85
NNF2YGR089W AVT3P36062 692 aa3.48□□□□□ -1.85
NNF2YGR089W YKR023WP36119 530 aaKnown RBP3.45□□□□□ -1.86
NNF2YGR089W TGL3P40308 642 aa3.43□□□□□ -1.86
NNF2YGR089W HOP09932 586 aa3.43□□□□□ -1.86
NNF2YGR089W SLX5P32828 619 aaKnown RBP3.43□□□□□ -1.86
NNF2YGR089W SCY1P53009 804 aa3.42□□□□□ -1.86
NNF2YGR089W TFC8Q12308 588 aa3.41□□□□□ -1.86
NNF2YGR089W SPT21P35209 758 aa3.39□□□□□ -1.87
NNF2YGR089W DCD1P06773 312 aa3.38□□□□□ -1.87
NNF2YGR089W BFR2Q06631 534 aaKnown RBP3.36□□□□□ -1.87
NNF2YGR089W BCH2P36122 765 aa3.28□□□□□ -1.88
NNF2YGR089W YOR238WQ08634 303 aa3.25□□□□□ -1.89
NNF2YGR089W RIM101P33400 625 aa3.24□□□□□ -1.89
NNF2YGR089W YJL171CP46992 396 aa3.22□□□□□ -1.89
NNF2YGR089W YIL055CP40523 627 aaKnown RBP3.21□□□□□ -1.9
NNF2YGR089W YBL029C-AQ3E756 94 aa3.21□□□□□ -1.9
NNF2YGR089W EPS1P40557 701 aa3.2□□□□□ -1.9
NNF2YGR089W SPP1Q03012 353 aa3.2□□□□□ -1.9
NNF2YGR089W MST1P07236 462 aa3.18□□□□□ -1.9
NNF2YGR089W PTP3P40048 928 aa3.18□□□□□ -1.9
NNF2YGR089W RGA2Q06407 1009 aa3.18□□□□□ -1.9
NNF2YGR089W BDF1P35817 686 aa3.18□□□□□ -1.9
NNF2YGR089W GTT3P39996 337 aa3.18□□□□□ -1.9
NNF2YGR089W VNX1P42839 908 aa3.17□□□□□ -1.9
NNF2YGR089W BBC1P47068 1157 aa3.17□□□□□ -1.9
NNF2YGR089W WSC3Q12215 556 aa3.17□□□□□ -1.9
NNF2YGR089W YAP5P40574 245 aa3.16□□□□□ -1.9
NNF2YGR089W NSR1P27476 414 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
NNF2YGR089W TIF11P38912 153 aaKnown RBP3.13□□□□□ -1.91
NNF2YGR089W BMT6Q12291 365 aa3.1□□□□□ -1.91
NNF2YGR089W OXP1P28273 1286 aa3.1□□□□□ -1.91
NNF2YGR089W RSM7P47150 247 aa3.1□□□□□ -1.91
NNF2YGR089W AIR2Q12476 344 aaKnown RBP3.09□□□□□ -1.92
NNF2YGR089W ULI1P43604 169 aa3.08□□□□□ -1.92
NNF2YGR089W FKH1P40466 484 aa3.08□□□□□ -1.92
NNF2YGR089W AI2P03876 854 aa3.07□□□□□ -1.92
NNF2YGR089W LDB19Q12502 818 aa3.06□□□□□ -1.92
NNF2YGR089W EAP1P36041 632 aaKnown RBP3.05□□□□□ -1.92
NNF2YGR089W YAH1Q12184 172 aaKnown RBP3.05□□□□□ -1.92
NNF2YGR089W TFG1P41895 735 aaPredicted RBP3.03□□□□□ -1.92
NNF2YGR089W MSB4Q12317 492 aa3.02□□□□□ -1.93
NNF2YGR089W NCR1Q12200 1170 aa3.01□□□□□ -1.93
NNF2YGR089W PIB1Q06651 286 aa3□□□□□ -1.93
NNF2YGR089W RTG1P32607 177 aa3□□□□□ -1.93
NNF2YGR089W IOC2Q12072 812 aa3□□□□□ -1.93
NNF2YGR089W YNL035CP53962 389 aaKnown RBP2.97□□□□□ -1.93
NNF2YGR089W TFA1P36100 482 aa2.96□□□□□ -1.94
NNF2YGR089W SET4P42948 560 aa2.96□□□□□ -1.94
NNF2YGR089W SEC61P32915 480 aa2.96□□□□□ -1.94
NNF2YGR089W TRP5P00931 707 aaKnown RBP2.95□□□□□ -1.94
NNF2YGR089W MRM1P25270 412 aa2.95□□□□□ -1.94
NNF2YGR089W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
NNF2YGR089W YOL036WQ08206 761 aa2.94□□□□□ -1.94
NNF2YGR089W BCK2P33306 851 aa2.93□□□□□ -1.94
NNF2YGR089W YMR1P47147 688 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
NNF2YGR089W CHL1P22516 861 aaPredicted RBP2.91□□□□□ -1.94
NNF2YGR089W SAP30P38429 201 aa2.91□□□□□ -1.94
NNF2YGR089W JIP4Q03361 876 aa2.91□□□□□ -1.94
NNF2YGR089W YLR271WQ06152 274 aa2.91□□□□□ -1.94
NNF2YGR089W ABP1P15891 592 aaKnown RBP2.9□□□□□ -1.94
NNF2YGR089W DBP1P24784 617 aaKnown RBP2.9□□□□□ -1.94
NNF2YGR089W PSD2P53037 1138 aaKnown RBP2.9□□□□□ -1.95
NNF2YGR089W RTG3P38165 486 aa2.89□□□□□ -1.95
NNF2YGR089W YDL129WQ07555 291 aa2.89□□□□□ -1.95
NNF2YGR089W YFR006WP43590 535 aa2.88□□□□□ -1.95
NNF2YGR089W VMA1P17255 1071 aaKnown RBP2.87□□□□□ -1.95
NNF2YGR089W GYP5Q12344 894 aa2.87□□□□□ -1.95
NNF2YGR089W HTA1P04911 132 aaKnown RBP2.87□□□□□ -1.95
NNF2YGR089W HTA2P04912 132 aa2.87□□□□□ -1.95
NNF2YGR089W PRE3P38624 215 aa2.87□□□□□ -1.95
NNF2YGR089W SAM3Q08986 587 aa2.87□□□□□ -1.95
NNF2YGR089W SSP1P38871 571 aa2.85□□□□□ -1.95
NNF2YGR089W DCW1P36091 449 aa2.84□□□□□ -1.95
NNF2YGR089W ELP4Q02884 456 aaKnown RBP2.84□□□□□ -1.95
NNF2YGR089W PTC4P38089 393 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms