RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C DRS1P32892 752 aaKnown RBP14.28□□□□□ -0.12
MSS116YDR194C MTC1P47018 478 aaKnown RBP13.14□□□□□ -0.31
MSS116YDR194C TFA1P36100 482 aa12.85□□□□□ -0.35
MSS116YDR194C BFR2Q06631 534 aaKnown RBP12.82□□□□□ -0.36
MSS116YDR194C AVT3P36062 692 aa11.96□□□□□ -0.49
MSS116YDR194C RQC2Q12532 1038 aaKnown RBP11.93□□□□□ -0.5
MSS116YDR194C DIP2Q12220 943 aaPredicted RBP11.79□□□□□ -0.52
MSS116YDR194C TAF7Q05021 590 aa11.18□□□□□ -0.62
MSS116YDR194C DMA1P38823 416 aa11□□□□□ -0.65
MSS116YDR194C RSE1Q04693 1361 aaKnown RBP10.8□□□□□ -0.68
MSS116YDR194C LEO1P38439 464 aa10.59□□□□□ -0.71
MSS116YDR194C PTP3P40048 928 aa10.49□□□□□ -0.73
MSS116YDR194C ISW2Q08773 1120 aa10.39□□□□□ -0.75
MSS116YDR194C RPL17AP05740 184 aaKnown RBP10.35□□□□□ -0.75
MSS116YDR194C RPL17BP46990 184 aaKnown RBP10.35□□□□□ -0.75
MSS116YDR194C RPG1P38249 964 aaKnown RBP10.26□□□□□ -0.77
MSS116YDR194C SSP1P38871 571 aa10.2□□□□□ -0.78
MSS116YDR194C RIM101P33400 625 aa10.19□□□□□ -0.78
MSS116YDR194C LEU3P08638 886 aa10.14□□□□□ -0.79
MSS116YDR194C SPT21P35209 758 aa10.1□□□□□ -0.79
MSS116YDR194C REB1P21538 810 aa10.08□□□□□ -0.8
MSS116YDR194C SAS10Q12136 610 aaPredicted RBP10.08□□□□□ -0.8
MSS116YDR194C PRI1P10363 409 aa9.94□□□□□ -0.82
MSS116YDR194C OXP1P28273 1286 aa9.93□□□□□ -0.82
MSS116YDR194C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
MSS116YDR194C YAH1Q12184 172 aaKnown RBP9.87□□□□□ -0.83
MSS116YDR194C YLR271WQ06152 274 aa9.83□□□□□ -0.84
MSS116YDR194C DMA2P53924 522 aa9.81□□□□□ -0.84
MSS116YDR194C RPN1P38764 993 aaKnown RBP9.75□□□□□ -0.85
MSS116YDR194C MGA2P40578 1113 aa9.72□□□□□ -0.85
MSS116YDR194C YIL055CP40523 627 aaKnown RBP9.7□□□□□ -0.86
MSS116YDR194C ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
MSS116YDR194C AAD16Q02895 342 aa9.59□□□□□ -0.87
MSS116YDR194C CST9Q06032 482 aa9.59□□□□□ -0.87
MSS116YDR194C RSM7P47150 247 aa9.57□□□□□ -0.88
MSS116YDR194C RLF2Q12495 606 aa9.57□□□□□ -0.88
MSS116YDR194C YKR023WP36119 530 aaKnown RBP9.53□□□□□ -0.88
MSS116YDR194C CKB1P43639 278 aa9.5□□□□□ -0.89
MSS116YDR194C TSR3Q12094 313 aaKnown RBP9.5□□□□□ -0.89
MSS116YDR194C FAP1P53971 965 aa9.48□□□□□ -0.89
MSS116YDR194C SPB4P25808 606 aaPredicted RBP9.48□□□□□ -0.89
MSS116YDR194C PSD2P53037 1138 aaKnown RBP9.44□□□□□ -0.9
MSS116YDR194C YPR148CQ06523 435 aa9.41□□□□□ -0.9
MSS116YDR194C SET1P38827 1080 aaKnown RBP9.4□□□□□ -0.9
MSS116YDR194C RAM2P29703 316 aa9.39□□□□□ -0.91
MSS116YDR194C VPS70P47161 811 aa9.39□□□□□ -0.91
MSS116YDR194C AI2P03876 854 aa9.33□□□□□ -0.92
MSS116YDR194C TFC8Q12308 588 aa9.32□□□□□ -0.92
MSS116YDR194C HOP09932 586 aa9.32□□□□□ -0.92
MSS116YDR194C DSF2P38213 736 aa9.28□□□□□ -0.92
MSS116YDR194C IFH1P39520 1085 aa9.28□□□□□ -0.92
MSS116YDR194C KIN1P13185 1064 aa9.27□□□□□ -0.93
MSS116YDR194C DCD1P06773 312 aa9.23□□□□□ -0.93
MSS116YDR194C YNR021WP53723 404 aaKnown RBP9.23□□□□□ -0.93
MSS116YDR194C PBS2P08018 668 aa9.2□□□□□ -0.94
MSS116YDR194C RCR1P38212 213 aa9.19□□□□□ -0.94
MSS116YDR194C BBC1P47068 1157 aa9.15□□□□□ -0.95
MSS116YDR194C GLC3P32775 704 aa9.13□□□□□ -0.95
MSS116YDR194C AIM7Q12156 149 aa9.13□□□□□ -0.95
MSS116YDR194C HGH1P48362 394 aaKnown RBP9.13□□□□□ -0.95
MSS116YDR194C MRM1P25270 412 aa9.11□□□□□ -0.95
MSS116YDR194C MAK11P20484 414 aaKnown RBP9.1□□□□□ -0.95
MSS116YDR194C BCH2P36122 765 aa9.1□□□□□ -0.95
MSS116YDR194C GUA1P38625 525 aaKnown RBP9.08□□□□□ -0.96
MSS116YDR194C MRPL32P25348 183 aa9.07□□□□□ -0.96
MSS116YDR194C MAM3Q12296 706 aa9.06□□□□□ -0.96
MSS116YDR194C CDC27P38042 758 aa9.06□□□□□ -0.96
MSS116YDR194C YML020WQ03722 664 aa9.04□□□□□ -0.96
MSS116YDR194C DIT2P21595 489 aa9.04□□□□□ -0.96
MSS116YDR194C RTG3P38165 486 aa9.04□□□□□ -0.96
MSS116YDR194C IES2P40154 320 aa9.04□□□□□ -0.96
MSS116YDR194C NUP42P49686 430 aaKnown RBP9.04□□□□□ -0.96
MSS116YDR194C EPS1P40557 701 aa9.01□□□□□ -0.97
MSS116YDR194C NOP8Q08287 484 aaPredicted RBP9□□□□□ -0.97
MSS116YDR194C COQ8P27697 501 aa8.98□□□□□ -0.97
MSS116YDR194C REF2P42073 533 aaPredicted RBP8.97□□□□□ -0.97
MSS116YDR194C HPC2Q01448 625 aa8.96□□□□□ -0.98
MSS116YDR194C MAK21Q12176 1025 aaKnown RBP8.96□□□□□ -0.98
MSS116YDR194C AIM44Q99299 758 aa8.96□□□□□ -0.98
MSS116YDR194C BDF1P35817 686 aa8.92□□□□□ -0.98
MSS116YDR194C SLX8P40072 274 aa8.92□□□□□ -0.98
MSS116YDR194C TFB3Q03290 321 aa8.92□□□□□ -0.98
MSS116YDR194C NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
MSS116YDR194C SSA1P10591 642 aaKnown RBP8.91□□□□□ -0.98
MSS116YDR194C ORC1P54784 914 aaPredicted RBP8.91□□□□□ -0.98
MSS116YDR194C GEF1P37020 779 aa8.9□□□□□ -0.98
MSS116YDR194C VPS29P38759 282 aa8.9□□□□□ -0.99
MSS116YDR194C ATF2P53296 535 aa8.9□□□□□ -0.99
MSS116YDR194C SUB2Q07478 446 aaKnown RBP8.9□□□□□ -0.99
MSS116YDR194C COX6P00427 148 aa8.86□□□□□ -0.99
MSS116YDR194C EDS1P38073 919 aa8.84□□□□□ -0.99
MSS116YDR194C PRY3P47033 881 aa8.84□□□□□ -0.99
MSS116YDR194C PKC1P24583 1151 aa8.83□□□□□ -1
MSS116YDR194C MIF2P35201 549 aa8.81□□□□□ -1
MSS116YDR194C BRL1P38770 471 aa8.81□□□□□ -1
MSS116YDR194C NAP1P25293 417 aaKnown RBP8.79□□□□□ -1
MSS116YDR194C GLN1P32288 370 aaKnown RBP8.77□□□□□ -1.01
MSS116YDR194C BIM1P40013 344 aa8.77□□□□□ -1.01
MSS116YDR194C STS1P38637 319 aa8.74□□□□□ -1.01
MSS116YDR194C YJL007CP47080 104 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms